Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20fagacearum_20[genbank_20GCA_5F002018255.1_202017-03- 03] 1,257 sequences; 26,782,037 total letters Query= NC_019401.1 Length=358663 Score E Sequences producing significant alignments: (Bits) Value seq185 87.8 4e-12 >seq185 Length=42258 Score = 87.8 bits (96), Expect = 4e-12 Identities = 282/430 (66%), Gaps = 11/430 (3%) Strand=Plus/Minus Query 150365 ATTCTTTCTCGTAAAACCAAAAAGAAT--GGTGCGTTAGTTGGTGAACCAGGTGTTGGTA 150422 || ||||| || | |||||| || || ||||| ||| |||||||||| ||||| || | Sbjct 21906 ATCCTTTCCCGCAGAACCAAGAATAACCCGGTGC-TTA-TTGGTGAACCCGGTGTCGGCA 21849 Query 150423 AAACACAAATCGTTGACGGATTAGCACAACGCATCGCTAATGGTGATGTTCCAGATTCTA 150482 | || ||||||| || | || ||||| ||| || |||||||||| || Sbjct 21848 AGACTACCGTCGTTGAAGGTCTTGCCCAACGTATCTGCAACCGTGATGTTCCTGACAACC 21789 Query 150483 TGAAAGATGTTGAAA--TTCTTTCTTTGAATATGGGTGCATTTACTGCTGGTACTAAGTA 150540 | || || || || |||| ||| | | | ||||| || |||||| | ||||| Sbjct 21788 TTAAGCAT--TGCAAGCTTCTGTCTCTTGACGTTGGTGCCCTTGTTGCTGGCAGCAAGTA 21731 Query 150541 TCGTGGTGAATTCGAAGAACGTGTAGACAATTTGCTACAAGAACTAAAAGAAC--GCGAT 150598 || ||||| || || || || | | | | | ||| |||| | |||| ||| Sbjct 21730 CCGCGGTGAGTTTGAGGAGCGCATGAAGAGTGTCCTAAAAGAGATTGAAGATTCAGCGGA 21671 Query 150599 GATG-TTATTCTGTTCATCGATGAAATCCATACTATTATGGGTGCTGGTGCGACTGGCGG 150657 |||| || |||| ||| |||||||||| ||| | | |||||||||||| | | || | Sbjct 21670 GATGATTGTTCTCTTCGTCGATGAAATTCATCTTCTGATGGGTGCTGGTTCCTCCGGTGA 21611 Query 150658 CGGTTCTTTGGATATGAGCAATATGTTAAAACCTGCTCTATCTCGCGGTGAAATTCGTGT 150717 || |||| |||| | ||||| ||| || |||| ||| || | | Sbjct 21610 GGGCGGCATGGACGCCGCCAATCTTTTAAAGCCTATGCTTGCTCGTGGTCAACTCCACTG 21551 Query 150718 CATCGGTGCAACAACCTACGATGAATATCGTAAACACATTGAAAAAGATGCAGCACTACA 150777 ||| || ||||| ||| || || || || ||||||| || ||||| || | | Sbjct 21550 CATTGGCGCAACCACCCTTTCCGAGTACCGCAAGTACATTGAGAAGGATGCCGCTTTTGA 21491 Query 150778 GCGTCGTTTC 150787 |||||||||| Sbjct 21490 GCGTCGTTTC 21481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1147571917697986