Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20fagacearum_20[genbank_20GCA_5F002018255.1_202017-03- 03] 1,257 sequences; 26,782,037 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq18 93.3 5e-14 >seq18 Length=113153 Score = 93.3 bits (102), Expect = 5e-14 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 138189 ATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGTAAATTT 138248 || ||||| |||||||| || ||||| || || ||||| ||||||||||| |||| || Sbjct 106404 ATGGGACCGACGCCAGGGCCACCACCACCGTGAGGAATGCAGAATGTCTTGTGTAGGTTA 106463 Query 138249 AGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCATTTAGA 138308 || || |||||||| |||||| |||| || | ||||| | ||| ||||| | Sbjct 106464 AGGTGGCATACATCAGCACCAATCTCACCCGGGGAAGTCAGACCAATCTGGGCATTCATG 106523 Query 138309 TTTGCACCATCGAGATATACCTGACCACC 138337 || || || || | || ||||||||||| Sbjct 106524 TTGGCGCCGTCCATGTAAACCTGACCACC 106552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578989302487640