Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20fagacearum_20[genbank_20GCA_5F002018255.1_202017-03-
03] 1,257 sequences; 26,782,037 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq14 109 5e-19
>seq14
Length=123593
Score = 109 bits (120), Expect = 5e-19
Identities = 206/299 (69%), Gaps = 8/299 (3%)
Strand=Plus/Plus
Query 34311 GATGAGCTCAGTCTCCGGGTTGT--CACATTCCGGACACAACACAAACTTGCGGATGAAA 34368
||||| ||||||| ||||| | ||| || | |||| || |||||| ||||||
Sbjct 67397 GATGACAACAGTCTCAGGGTTCTTGCACTTTTTG--CACAGGACGAACTTGGTGATGAAG 67454
Query 34369 CCATCAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCG 34428
|| | || ||||||| | ||| || ||||||||| ||||||| ||| | || ||
Sbjct 67455 CCGTAAACGTGGTCCTGAAGCTTCTTGGTGTCGTGGGAACCGTTGATGATCCAGCGGTCA 67514
Query 34429 TTTTTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAA 34488
| ||| || | || || || || |||||| | || |||||||| || ||||
Sbjct 67515 TCCTTGGGGTCATTGTTGGTCTGAGCACCGAGCTCGAAACCAAAGTACTTGATCAGGTAC 67574
Query 34489 ATGGCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATG 34548
| ||||| | || |||| ||| | | | || |||| || |||||||||||
Sbjct 67575 GAACCAGGACGGGCGAGAGCCTGGGCAACCTGCGACAGGTTGGTGACAACAGTCTTGATA 67634
Query 34549 CCGTTGCCCTTTCCTTCGACCTTGG--CGCAGATGCGCGGCATTTTGTAGCGGTAGAAC 34605
|| || ||||| ||||||| ||||| | ||| || ||||| ||||| |||||||||
Sbjct 67635 CCATTACCCTTGCCTTCGATCTTGGTTTGAAGA--CGGGGCATCTTGTAACGGTAGAAC 67691
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412835275395701
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |