Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20fagacearum_20[genbank_20GCA_5F002018255.1_202017-03- 03] 1,257 sequences; 26,782,037 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq14 109 5e-19 >seq14 Length=123593 Score = 109 bits (120), Expect = 5e-19 Identities = 206/299 (69%), Gaps = 8/299 (3%) Strand=Plus/Plus Query 34311 GATGAGCTCAGTCTCCGGGTTGT--CACATTCCGGACACAACACAAACTTGCGGATGAAA 34368 ||||| ||||||| ||||| | ||| || | |||| || |||||| |||||| Sbjct 67397 GATGACAACAGTCTCAGGGTTCTTGCACTTTTTG--CACAGGACGAACTTGGTGATGAAG 67454 Query 34369 CCATCAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCG 34428 || | || ||||||| | ||| || ||||||||| ||||||| ||| | || || Sbjct 67455 CCGTAAACGTGGTCCTGAAGCTTCTTGGTGTCGTGGGAACCGTTGATGATCCAGCGGTCA 67514 Query 34429 TTTTTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAA 34488 | ||| || | || || || || |||||| | || |||||||| || |||| Sbjct 67515 TCCTTGGGGTCATTGTTGGTCTGAGCACCGAGCTCGAAACCAAAGTACTTGATCAGGTAC 67574 Query 34489 ATGGCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATG 34548 | ||||| | || |||| ||| | | | || |||| || ||||||||||| Sbjct 67575 GAACCAGGACGGGCGAGAGCCTGGGCAACCTGCGACAGGTTGGTGACAACAGTCTTGATA 67634 Query 34549 CCGTTGCCCTTTCCTTCGACCTTGG--CGCAGATGCGCGGCATTTTGTAGCGGTAGAAC 34605 || || ||||| ||||||| ||||| | ||| || ||||| ||||| ||||||||| Sbjct 67635 CCATTACCCTTGCCTTCGATCTTGGTTTGAAGA--CGGGGCATCTTGTAACGGTAGAAC 67691 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412835275395701