Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20fagacearum_20[genbank_20GCA_5F002018255.1_202017-03- 03] 1,257 sequences; 26,782,037 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq30 102 7e-17 >seq30 Length=92847 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 |||||||| |||||||| ||| | || ||||| ||||||||| | || ||| | Sbjct 12476 ATGCAAATCTTTGTCAAGACTCTGACTGGCAAGACCATTACCCTGGAGGTTGAGACCTCG 12535 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || ||| | | | | || || |||||| || || || ||| | ||| ||||||| Sbjct 12536 GACACTATTGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCCCCGGATCAG 12595 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| | || |||| ||| || || ||||| || |||| || |||| ||||||||| Sbjct 12596 CAGCGTCTCATTTTTGCTGGAAAGCAGCTTGAAGACGGTCGTACCCTGGCAGACTACAAC 12655 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGT 107764 || || ||||||||||| |||| |||| Sbjct 12656 ATCCAGAAGGAGTCTACTCTGCATCTGGT 12684 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398870689332073