Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20fagacearum_20[genbank_20GCA_5F002018255.1_202017-03- 03] 1,257 sequences; 26,782,037 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq30 84.2 5e-11 >seq30 Length=92847 Score = 84.2 bits (92), Expect = 5e-11 Identities = 136/196 (69%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| || ||||| ||||| || ||||| | ||||| || || ||||| | || Sbjct 12262 CAAGACCCTCACCGGAAAGACCATCACCCTAGAAGTCGAGTCCTCGGACACTATTGACAA 12321 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| |||||||| || || ||||| || || ||| || | || || || Sbjct 12322 TGTCAAGTCCAAGATTCAGGACAAGGAAGGCATCCCCCCTGACCAGCAGCGCCTGATTTT 12381 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 ||| || |||||| |||| || || | || |||| || |||||| | ||||| ||||| Sbjct 12382 CGCAGGCAAGCAGCTGGAGGACGGTCGTACCCTGGCAGACTACAACATTCAGAAGGAGTC 12441 Query 206364 TACTCTTCACCTTGTT 206379 |||||| || || ||| Sbjct 12442 TACTCTGCATCTCGTT 12457 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181801766406697