Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20fagacearum_20[genbank_20GCA_5F002018255.1_202017-03-
03] 1,257 sequences; 26,782,037 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq85 89.7 5e-13
>seq85
Length=66049
Score = 89.7 bits (98), Expect = 5e-13
Identities = 145/206 (70%), Gaps = 2/206 (1%)
Strand=Plus/Plus
Query 47058 ATCGAAAAGGAGTTTTTTACTGCGGCGCTGCCCGTCGCCTTGCTGGGCATGAACGCACAG 47117
|| || |||||||| || |||| ||| |||||| ||| |||| ||||||||||| |
Sbjct 3287 ATTGAGAAGGAGTTCTTGACTGAGGCCCTGCCCTGTGCCCTGCTTGGCATGAACGCCGAC 3346
Query 47118 TCTATGTGCGAATATATTGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGACAACCG 47177
||| || ||||| ||||| || || ||||| || || ||||| ||||
Sbjct 3347 CTCATGAAGACCTACATTGAATTTGTCGCCGACCGTCTCCTGATGGCCCTCGG-CAACGA 3405
Query 47178 AAATAT-TTTAATGCTCGTAATCCGTTTGAGTTTATGAACAACATTTCGCTCGAGGGCAA 47236
|| | | || || | || || ||||| |||||| | ||||| ||||| | |||||
Sbjct 3406 CAAGGTCTACAAGGCCAGCAACCCCTTTGACTTTATGGAGAACATCTCGCTTGGTGGCAA 3465
Query 47237 AACCAATTTTTTCGAGAAACGAGTCG 47262
||||| || |||||||| || ||||
Sbjct 3466 GACCAACTTCTTCGAGAAGCGTGTCG 3491
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476603711246520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |