Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20fagacearum_20[genbank_20GCA_5F002018255.1_202017-03- 03] 1,257 sequences; 26,782,037 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq59 87.8 1e-12 >seq59 Length=73848 Score = 87.8 bits (96), Expect = 1e-12 Identities = 136/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || |||||||||||||| || ||||| ||||| || ||||| || ||||| ||||| ||| Sbjct 15636 AAGATGCAGATTTTCGTCAAGACCCTAACGGGTAAGACGATTACCCTCGAGGTTGAGTCC 15577 Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 ||||||| | || ||| | || | || || ||||| || || | || || || Sbjct 15576 TCGGACACCATCGACAATGTCAAGTC-CAAGATCCAGGACAAGGAGGGCATTCCTCCGGA 15518 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786 || ||||| | || ||||| ||||| || ||||| || | || || | | || || Sbjct 15517 CCAGCAGCGCCTGATCTTTGCTGGCAAGCAGCTGGAGGATGGCCGTACCCTGGCGGACTA 15458 Query 23787 CAACATACAAAA 23798 ||| || || || Sbjct 15457 CAATATCCAGAA 15446 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338004421798556