Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20harringtonii_20[genbank_20GCA_5F002018265.1_202017- 03-03] 813 sequences; 26,062,404 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq126 134 3e-26 >seq126 Length=40607 Score = 134 bits (148), Expect = 3e-26 Identities = 179/249 (72%), Gaps = 0/249 (0%) Strand=Plus/Minus Query 230386 ATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC 230445 ||||| || || || |||| | ||| ||||||||| | || ||| | || ||| | Sbjct 38049 ATCATCACTGACGCCGTTGTGATCGAGAAGGAGTTCCTCACGGAGGCTCTGCCCTGTGGT 37990 Query 230446 CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 230505 || | || |||||||| || || ||| || ||||| || || || || |||||| | Sbjct 37989 CTACTGGGAATGAACGCCGATCTGATGAAGCAATACATTGAGTTTGTTGCTGACCGCCTG 37930 Query 230506 TTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAG 230565 ||||||| || || ||||||| || ||| | | ||||||||| | || |||||| Sbjct 37929 CTTGTTGCTCTAGGCAACGAGAAGGTTTACCGTGCCACGAACCCCTTCGACTTCATGGAG 37870 Query 230566 CTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGG 230625 ||| ||||| || |||||||||||||| || ||||||||| ||||||| |||| | Sbjct 37869 AACATCTCGCTCGGCGGCAAGACCAACTTCTTTGAGAAGCGTGTCGGTGACTACCAGAAG 37810 Query 230626 CCTGGTGTG 230634 | || ||| Sbjct 37809 GCCGGCGTG 37801 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057812981110190