Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20harringtonii_20[genbank_20GCA_5F002018265.1_202017-
03-03] 813 sequences; 26,062,404 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq126 134 3e-26
>seq126
Length=40607
Score = 134 bits (148), Expect = 3e-26
Identities = 179/249 (72%), Gaps = 0/249 (0%)
Strand=Plus/Minus
Query 230386 ATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC 230445
||||| || || || |||| | ||| ||||||||| | || ||| | || ||| |
Sbjct 38049 ATCATCACTGACGCCGTTGTGATCGAGAAGGAGTTCCTCACGGAGGCTCTGCCCTGTGGT 37990
Query 230446 CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 230505
|| | || |||||||| || || ||| || ||||| || || || || |||||| |
Sbjct 37989 CTACTGGGAATGAACGCCGATCTGATGAAGCAATACATTGAGTTTGTTGCTGACCGCCTG 37930
Query 230506 TTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAG 230565
||||||| || || ||||||| || ||| | | ||||||||| | || ||||||
Sbjct 37929 CTTGTTGCTCTAGGCAACGAGAAGGTTTACCGTGCCACGAACCCCTTCGACTTCATGGAG 37870
Query 230566 CTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGG 230625
||| ||||| || |||||||||||||| || ||||||||| ||||||| |||| |
Sbjct 37869 AACATCTCGCTCGGCGGCAAGACCAACTTCTTTGAGAAGCGTGTCGGTGACTACCAGAAG 37810
Query 230626 CCTGGTGTG 230634
| || |||
Sbjct 37809 GCCGGCGTG 37801
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057812981110190
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |