Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20harringtonii_20[genbank_20GCA_5F002018265.1_202017-
03-03] 813 sequences; 26,062,404 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq545 120 7e-22
>seq545
Length=97716
Score = 120 bits (132), Expect = 7e-22
Identities = 228/329 (69%), Gaps = 10/329 (3%)
Strand=Plus/Minus
Query 248818 TACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAG 248877
||| | | ||||| ||||| ||||| ||| |||||||| |||||| |||| ||||||
Sbjct 75209 TACCAGTACTTTGGCTTCAAGACGCTCGAGCGTTCGTATCTGCTCAAACTTGACGGCAAG 75150
Query 248878 ATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGAC 248937
||||| ||||| ||||||||| | ||||| || ||||| || ||| || ||||
Sbjct 75149 ATCGTTGAACGTCCCCAGCACATGATAATGCGTGTTGCTGTGGGTATT---TGGGGTGAC 75093
Query 248938 A---TAGAGAGCGTGCTCGAGACGTACACCGGAATGAGT-GAACGCTGGATGACACATGC 248993
| | || ||||||| || || |||| | ||| | | | | | | || || ||
Sbjct 75092 AAAGTCGAACGCGTGCTTGAAACCTACAACCTTATGTCTAGCAAG-TTCTTCACTCACGC 75034
Query 248994 CACACCGACGCTCTTCAACGCCGGTACCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCT 249053
|||| ||||||||||| |||||||| | | ||| || || || || || |
Sbjct 75033 ATCACCTACGCTCTTCAATGCCGGTACTCCCCAGGCGCAGTTGTCTTCATGTTTCCTAGT 74974
Query 249054 TGCCATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAA-ACAGACGGCGAAGA 249112
|| |||| |||| ||| | |||| |||||||| || || || || || | || | ||
Sbjct 74973 TGACATGAAAGATGACAGTATCGAAGGCATTTACGATACCCTCAAGACTTGC-GCCATGA 74915
Query 249113 TTTCTAAATTCGCGGGCGGAATCGGTCTC 249141
|||| || | || || || |||||||||
Sbjct 74914 TTTCCAAGATGGCCGGTGGTATCGGTCTC 74886
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073755215045184
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |