Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20harringtonii_20[genbank_20GCA_5F002018265.1_202017- 03-03] 813 sequences; 26,062,404 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq545 100 4e-16 >seq545 Length=97716 Score = 100 bits (110), Expect = 4e-16 Identities = 212/316 (67%), Gaps = 3/316 (1%) Strand=Plus/Plus Query 64827 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 64886 |||| ||||| |||||||| ||||| || | || | | ||||||||| |||||||| Sbjct 73369 TCCTGGTCCACAGTGAATTGGATGGGTGCAGCAGCAGCCTGCGTACGTAGGTAGTACATA 73428 Query 64887 CCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTC 64946 ||||| || || || || |||| ||| ||| ||||| || || | ||| | Sbjct 73429 CCCGTCTTGAGGCCCAGTTTCCAGCCGGCAAAGTGCATGCTGGTGATCTTGCCCATGGTG 73488 Query 64947 GGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 65006 |||||| || || || || | ||| || ||| || ||||| || || | ||| ||| Sbjct 73489 GGATCTTTCATGTGAATGTTTAGAGACTGCGATTGGTCAATGAAAGCACCACGGTCAGCA 73548 Query 65007 GCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATA 65066 ||||||| || | || || | ||| ||||||| || || || | |||||| Sbjct 73549 GCCATTTGTACAACTGTACGCTGGGAAATCTCCCAAACCGTCTTGTACAGAGCTTTAATA 73608 Query 65067 TCTTCTGGAAGGTTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTG 65123 || |||| | | | | ||||||||||| || || || ||||| | |||||| Sbjct 73609 TCAGGAGGAATGCTGGAAATGTTCTGAATGGAGCCGTTGTCGGCAATAATGCGATTCTTC 73668 Query 65124 ATCTCATCATTCCATA 65139 || | ||| ||||| Sbjct 73669 ATATTGTCAGACCATA 73684 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658166111318920