Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20harringtonii_20[genbank_20GCA_5F002018265.1_202017- 03-03] 813 sequences; 26,062,404 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq745 120 5e-22 >seq745 Length=84346 Score = 120 bits (132), Expect = 5e-22 Identities = 170/233 (73%), Gaps = 7/233 (3%) Strand=Plus/Plus Query 70067 GGCGATCTGGGGCCAGTGTACGGATTCCAGTGGAGGCACTCGGGCACCAAGTATGTAGAC 70126 |||||||||||||| || ||||| || |||||| | || | || || ||||||| || Sbjct 49709 GGCGATCTGGGGCCTGTATACGGCTTTCAGTGGCGCCATTTTGGAGCCGAGTATGTGGAT 49768 Query 70127 TGCGAGACAGACTATTCGGGTCAGGGTGTTGATCAA-TTGCAGACAATCATTGACACTCT 70185 | ||||||||||| ||||||| |||||||||||| | || || | || ||| || Sbjct 49769 GCCAAGACAGACTATACGGGTCAAGGTGTTGATCAACTGGCCGA-GGTTATCCACAAACT 49827 Query 70186 CAAGACCAATCCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATTTGCA 70245 ||||||||| || || || | ||| | ||| | ||||| || ||||||||| | Sbjct 49828 CAAGACCAACCCGTACGACCGGCGTATCATTATGACGGCTTGGAACCCCGCAGATTTGAA 49887 Query 70246 CCAAATGGCACTACCACCGTGTCAC-TGTTTGGCTCAGTTTTA---CTCGTAC 70294 | ||||| || || ||||| ||| ||||| || ||||| || ||||||| Sbjct 49888 GAAGATGGCGCTGCCGCCGTGCCACATGTTT-GCGCAGTTCTATGTCTCGTAC 49939 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741051668985880