Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20harringtonii_20[genbank_20GCA_5F002018265.1_202017-
03-03] 813 sequences; 26,062,404 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq745 120 5e-22
>seq745
Length=84346
Score = 120 bits (132), Expect = 5e-22
Identities = 170/233 (73%), Gaps = 7/233 (3%)
Strand=Plus/Plus
Query 70067 GGCGATCTGGGGCCAGTGTACGGATTCCAGTGGAGGCACTCGGGCACCAAGTATGTAGAC 70126
|||||||||||||| || ||||| || |||||| | || | || || ||||||| ||
Sbjct 49709 GGCGATCTGGGGCCTGTATACGGCTTTCAGTGGCGCCATTTTGGAGCCGAGTATGTGGAT 49768
Query 70127 TGCGAGACAGACTATTCGGGTCAGGGTGTTGATCAA-TTGCAGACAATCATTGACACTCT 70185
| ||||||||||| ||||||| |||||||||||| | || || | || ||| ||
Sbjct 49769 GCCAAGACAGACTATACGGGTCAAGGTGTTGATCAACTGGCCGA-GGTTATCCACAAACT 49827
Query 70186 CAAGACCAATCCAACAGATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATTTGCA 70245
||||||||| || || || | ||| | ||| | ||||| || ||||||||| |
Sbjct 49828 CAAGACCAACCCGTACGACCGGCGTATCATTATGACGGCTTGGAACCCCGCAGATTTGAA 49887
Query 70246 CCAAATGGCACTACCACCGTGTCAC-TGTTTGGCTCAGTTTTA---CTCGTAC 70294
| ||||| || || ||||| ||| ||||| || ||||| || |||||||
Sbjct 49888 GAAGATGGCGCTGCCGCCGTGCCACATGTTT-GCGCAGTTCTATGTCTCGTAC 49939
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741051668985880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |