Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20harringtonii_20[genbank_20GCA_5F002018265.1_202017- 03-03] 813 sequences; 26,062,404 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq1 82.4 7e-11 >seq1 Length=316991 Score = 82.4 bits (90), Expect = 7e-11 Identities = 115/159 (72%), Gaps = 2/159 (1%) Strand=Plus/Minus Query 5594 AGCTGCGCTATTCGGTCGCCCGTCTTT-ACCTCGAAATCGTTGTGGCCGAAGTTGAACAG 5652 ||||| || || ||||| ||| ||||| |||||||| ||| | | |||||| || Sbjct 271753 AGCTGAGCAATGCGGTCACCC-TCTTTGACCTCGAAGTCGGCATCATGGTGGTTGAATAG 271695 Query 5653 CACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCCCACGTCGATGAA 5712 | || || | ||| ||||| ||||| || || || || || || |||||||| Sbjct 271694 GAGAACCTTGACTTCGCCACGGTAATCGGCATCAATGACACCAGCACCGGTATCGATGAA 271635 Query 5713 GTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCC 5751 ||||||| | |||||||| ||||||||||| | ||| || Sbjct 271634 GTGCTTGGCAGCCAGGCCAGAGCGGGGAGCGATGCGACC 271596 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430050138832856