Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20harringtonii_20[genbank_20GCA_5F002018265.1_202017- 03-03] 813 sequences; 26,062,404 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq734 89.7 4e-13 >seq734 Length=84471 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 48515 AACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCC 48574 || || || ||||| || |||||||||||| ||||| || | | || | ||| Sbjct 21234 AAAACCAAGTGAAGAGTAGACTCCTTTTGAATATTGTAGTCGGATAGGGTGCGGCCATCC 21293 Query 48575 TCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCC 48634 || |||||||| || || |||| | ||||||||| ||| || | || ||||||||| Sbjct 21294 TCAAGCTGCTTTCCAGCGAAAATGAGACGCTGCTGGTCCGGGGGAATACCCTCCTTGTCC 21353 Query 48635 ATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTT 48694 || || ||||| | |||||||| | ||||||| ||||| || ||||| Sbjct 21354 TGGATCTTGGACTTGACGTTGTCAATGGTATCCGAAGACTCCACCTCGAGGGTAATGGTC 21413 Query 48695 TTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || || || ||||| || || || || ||||| Sbjct 21414 TTTCCAGTTAGAGTCTTGACGAAGATTTGCAT 21445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421247026058813