Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20harringtonii_20[genbank_20GCA_5F002018265.1_202017- 03-03] 813 sequences; 26,062,404 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq734 93.3 4e-14 >seq734 Length=84471 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || |||||| | || || || |||| || |||| |||||||| || Sbjct 21445 ATGCAAATCTTCGTCAAGACTCTAACTGGAAAGACCATTACCCTCGAGGTGGAGTCTTCG 21386 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 || || || || | ||| || ||| ||||| || || ||||| || ||||| Sbjct 21385 GATACCATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGTATTCCCCCGGACCAG 21326 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | ||||| || || || || | || |||| ||||| | ||| |||||| Sbjct 21325 CAGCGTCTCATTTTCGCTGGAAAGCAGCTTGAGGATGGCCGCACCCTATCCGACTACAAT 21266 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGT 25207 |||||||| || || || || || || || Sbjct 21265 ATTCAAAAGGAGTCTACTCTTCACTTGGT 21237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433323706396595