Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20harringtonii_20[genbank_20GCA_5F002018265.1_202017-
03-03] 813 sequences; 26,062,404 total letters
Query= NC_009333.1
Length=137969
Score E
Sequences producing significant alignments: (Bits) Value
seq745 100 3e-16
>seq745
Length=84346
Score = 100 bits (110), Expect = 3e-16
Identities = 193/282 (68%), Gaps = 2/282 (1%)
Strand=Plus/Minus
Query 20372 AACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCACGCACACATA 20431
|||| ||| || ||||| ||||||||| | ||| || || |||||||| || ||||
Sbjct 49917 AACATGTGGCACGGCGGCAGCGCCATCTTCTTCAAATCTGCGGGGTTCCAAGCCGTCATA 49858
Query 20432 ATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATGTACGACAATTGGTCA 20491
||||| | | |||| ||| || | || | | | | || | | || ||| |||
Sbjct 49857 ATGATACGCCGGTCGTACGGGTTGGTCTTGAGTTTGTGGATAACCTCGGCCAGTTGATCA 49798
Query 20492 AACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCGCCCCAAAGTGCCTCCAC 20551
| || || || |||||||| | | || ||||| ||| | || ||||| || | ||||
Sbjct 49797 ACACCTTGACCCGTATAGTCTGTCTTGGCATCCACATACTCGGCTCCAAAATGGCGCCAC 49738
Query 20552 TGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTCTGTGCGCCAGGCCGCGCCCGGCC 20611
|| || ||||| ||||| |||| ||| || | | ||| | || || ||| | | |
Sbjct 49737 TGAAAGCCGTATACAGGCCCCAGATCGCCGACTTCACGGTGGCCTAGACC-CGCGCTGTC 49679
Query 20612 AGGAA-CTCCCTGGAGCCATTTTTGTCCCATATCTTGACTCC 20652
| ||| ||| | |||||||| |||||||||||||| ||
Sbjct 49678 AAGAAACTCGCGCGAGCCATTGCCATCCCATATCTTGACACC 49637
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 441368314548920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |