Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20harringtonii_20[genbank_20GCA_5F002018265.1_202017- 03-03] 813 sequences; 26,062,404 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq745 100 3e-16 >seq745 Length=84346 Score = 100 bits (110), Expect = 3e-16 Identities = 193/282 (68%), Gaps = 2/282 (1%) Strand=Plus/Minus Query 20372 AACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCACGCACACATA 20431 |||| ||| || ||||| ||||||||| | ||| || || |||||||| || |||| Sbjct 49917 AACATGTGGCACGGCGGCAGCGCCATCTTCTTCAAATCTGCGGGGTTCCAAGCCGTCATA 49858 Query 20432 ATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATGTACGACAATTGGTCA 20491 ||||| | | |||| ||| || | || | | | | || | | || ||| ||| Sbjct 49857 ATGATACGCCGGTCGTACGGGTTGGTCTTGAGTTTGTGGATAACCTCGGCCAGTTGATCA 49798 Query 20492 AACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCGCCCCAAAGTGCCTCCAC 20551 | || || || |||||||| | | || ||||| ||| | || ||||| || | |||| Sbjct 49797 ACACCTTGACCCGTATAGTCTGTCTTGGCATCCACATACTCGGCTCCAAAATGGCGCCAC 49738 Query 20552 TGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTCTGTGCGCCAGGCCGCGCCCGGCC 20611 || || ||||| ||||| |||| ||| || | | ||| | || || ||| | | | Sbjct 49737 TGAAAGCCGTATACAGGCCCCAGATCGCCGACTTCACGGTGGCCTAGACC-CGCGCTGTC 49679 Query 20612 AGGAA-CTCCCTGGAGCCATTTTTGTCCCATATCTTGACTCC 20652 | ||| ||| | |||||||| |||||||||||||| || Sbjct 49678 AAGAAACTCGCGCGAGCCATTGCCATCCCATATCTTGACACC 49637 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441368314548920