Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20harringtonii_20[genbank_20GCA_5F002018265.1_202017-
03-03] 813 sequences; 26,062,404 total letters
Query= NC_015280.1
Length=181044
Score E
Sequences producing significant alignments: (Bits) Value
seq323 149 7e-31
>seq323
Length=119441
Score = 149 bits (164), Expect = 7e-31
Identities = 276/402 (69%), Gaps = 5/402 (1%)
Strand=Plus/Minus
Query 154719 TGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCTAGTGCTGTCATGGCAGGGATG 154778
|||||||| || | || || || ||||| || ||||| |||| ||||||||| |||
Sbjct 56522 TGTTTGATTCCTGTCTCTGCCCACGGAACCAACCCTGCCTCGGCTGCCATGGCAGGTATG 56463
Query 154779 AAAGTTGTAGGTGTCAAGTGTGAT---GATGATGGTAACATAGACATCAAAGATCTAGAG 154835
||||| | ||||||||||| | ||| ||| | || ||| ||||| ||
Sbjct 56462 CGTGTTGTTCCTATCAAGTGTGATACCACTACTGGGAACTTGGATATCGCTGATCTGGAA 56403
Query 154836 AAGAA-AGCAATCATGAATACATTTGAACTGTCATGTATTATGATTACATACCCATCTAC 154894
||| |||| | | || | |||||| || |||||||| || ||||| |||
Sbjct 56402 GCGAAGTGCAA-AAAGCATGCTGATGAACTTGGCTGCATTATGATCACTTACCCTAGTAC 56344
Query 154895 ACATGGTGTATTTGAAACTAACATTAGACAGATATGTAAGATCGTTCATGACAATGGTGG 154954
|||| | |||||| || || || || || ||| | | || |||| | |||||||
Sbjct 56343 TTTTGGTATCTTTGAACCTGACGTTCGAAAGGCCTGTGATCTTGTGCATGCCTATGGTGG 56284
Query 154955 TCAGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAACCATGTGA 155014
|||||||| | || || || || | ||||| || | || || | || ||||
Sbjct 56283 CCAGGTATACATGGACGGCGCCAACATGAATGCCCAAATTGGTCTTACCTCTCCTGGTGA 56224
Query 155015 GTATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCACATGGAGG 155074
| ||| || ||||| || || || ||| ||||||| |||||||| ||||| ||||||||
Sbjct 56223 GATTGGCGCTGATGTGTGCCACCTGAACCTACATAAGACATTCTGCATTCCTCATGGAGG 56164
Query 155075 TGGAGGTCCTGGCGTAGGTCCTATAGGTGTAGCAAAACATCT 155116
|| || |||||||| || ||||| |||| ||||||||
Sbjct 56163 AGGTGGCCCTGGCGTCGGCCCTATCTGTGTCAAGAAACATCT 56122
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 579206913749920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |