Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20harringtonii_20[genbank_20GCA_5F002018265.1_202017-
03-03] 813 sequences; 26,062,404 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq323 140 4e-28
>seq323
Length=119441
Score = 140 bits (154), Expect = 4e-28
Identities = 274/402 (68%), Gaps = 5/402 (1%)
Strand=Plus/Minus
Query 159394 TGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAGTGATGGCAGGGATG 159453
|||||||| || | || || || ||||| || ||||| || || | |||||||| |||
Sbjct 56522 TGTTTGATTCCTGTCTCTGCCCACGGAACCAACCCTGCCTCGGCTGCCATGGCAGGTATG 56463
Query 159454 AAAGTTGTAGGTGTCAAGTGTGATGA---TGATGGCAACATAGACATCAAAGATCTAGAG 159510
||||| | ||||||||||| | ||| ||| | || ||| ||||| ||
Sbjct 56462 CGTGTTGTTCCTATCAAGTGTGATACCACTACTGGGAACTTGGATATCGCTGATCTGGAA 56403
Query 159511 AAGAAA-GCAATCATGAATACATTTGAACTGTCATGTATTATGATTACATATCCATCTAC 159569
||| |||| | | || | |||||| || |||||||| || || || |||
Sbjct 56402 GCGAAGTGCAAAAA-GCATGCTGATGAACTTGGCTGCATTATGATCACTTACCCTAGTAC 56344
Query 159570 ACATGGTGTATTTGAAACAAACATCAGACAGATATGTAAGATTGTTCATGAGAATGGTGG 159629
|||| | |||||| | || | || || ||| | |||| |||| |||||||
Sbjct 56343 TTTTGGTATCTTTGAACCTGACGTTCGAAAGGCCTGTGATCTTGTGCATGCCTATGGTGG 56284
Query 159630 TCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTAGCAAAACCATGTGA 159689
|||||||| | || || || || | ||||| || | ||||| | || ||||
Sbjct 56283 CCAGGTATACATGGACGGCGCCAACATGAATGCCCAAATTGGTCTTACCTCTCCTGGTGA 56224
Query 159690 CTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGTATTCCACATGGAGG 159749
||| || ||||| || || || ||| |||||||||||||||| ||||| ||||||||
Sbjct 56223 GATTGGCGCTGATGTGTGCCACCTGAACCTACATAAGACATTCTGCATTCCTCATGGAGG 56164
Query 159750 TGGAGGTCCTGGCGTAGGTCCTATTGGTGTAGCAAAACATCT 159791
|| || |||||||| || ||||| |||| ||||||||
Sbjct 56163 AGGTGGCCCTGGCGTCGGCCCTATCTGTGTCAAGAAACATCT 56122
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588045223929680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |