Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20harringtonii_20[genbank_20GCA_5F002018265.1_202017- 03-03] 813 sequences; 26,062,404 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq335 96.9 3e-14 >seq335 Length=119075 Score = 96.9 bits (106), Expect = 3e-14 Identities = 98/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468 || || || || || || || ||||| || || || ||||| || |||||||| | ||| Sbjct 40289 ACAGTTCCTGCTTACTTCAACGACTCTCAGCGCCAGGCTACCAAGGATGCTGGCCAGATT 40348 Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528 || ||||||||||| || ||| || |||| || || ||||||||||| || || ||||| Sbjct 40349 GCCGGACTTAATGTCCTGCGTGTTGTCAACGAGCCCACTGCTGCTGCGCTGGCCTATGGT 40408 Query 550529 CTTGATAA 550536 || || || Sbjct 40409 CTGGACAA 40416 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029253004893370