Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20harringtonii_20[genbank_20GCA_5F002018265.1_202017-
03-03] 813 sequences; 26,062,404 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq335 96.9 3e-14
>seq335
Length=119075
Score = 96.9 bits (106), Expect = 3e-14
Identities = 98/128 (77%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468
|| || || || || || || ||||| || || || ||||| || |||||||| | |||
Sbjct 40289 ACAGTTCCTGCTTACTTCAACGACTCTCAGCGCCAGGCTACCAAGGATGCTGGCCAGATT 40348
Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528
|| ||||||||||| || ||| || |||| || || ||||||||||| || || |||||
Sbjct 40349 GCCGGACTTAATGTCCTGCGTGTTGTCAACGAGCCCACTGCTGCTGCGCTGGCCTATGGT 40408
Query 550529 CTTGATAA 550536
|| || ||
Sbjct 40409 CTGGACAA 40416
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4029253004893370
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |