Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20harringtonii_20[genbank_20GCA_5F002018265.1_202017-
03-03] 813 sequences; 26,062,404 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq323 125 8e-24
>seq323
Length=119441
Score = 125 bits (138), Expect = 8e-24
Identities = 271/402 (67%), Gaps = 5/402 (1%)
Strand=Plus/Plus
Query 138171 AGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAG 138230
|||||||| |||| ||||| || |||||||| || || |||||||| ||||| |||
Sbjct 56122 AGATGTTTCTTGACACAGATAGGGCCGACGCCAGGGCCACCTCCTCCATGAGGAATGCAG 56181
Query 138231 AATGTCTTATGTAAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGA 138290
||||||||||||| || || || || ||||| || ||| |||| || | |||
Sbjct 56182 AATGTCTTATGTAGGTTCAGGTGGCACACATCAGCGCCAATCTCACCAGGAGAGGTAAGA 56241
Query 138291 CCTACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACG 138350
|| | || ||||| | || || || || | |||||||| ||||||| | |||| ||
Sbjct 56242 CCAATTTGGGCATTCATGTTGGCGCCGTCCATGTATACCTGGCCACCATAGGCATGCACA 56301
Query 138351 ATCTTACATATCTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATC 138410
| | ||| || || | || | |||||| | |||| ||| || || || |||
Sbjct 56302 AGATCACAGGCCTTTCGAACGTCAGGTTCAAAGATACCAAAAGTACTAGGGTAAGTGATC 56361
Query 138411 ATAATACATGAGAGTTCAAATGTATTCATGATTGC-TTTCTTCTCTAGATCTTTGATGTC 138469
||||| || |||||| | || | | |||| ||| || ||||| ||| ||
Sbjct 56362 ATAATGCAGCCAAGTTCATCAGCATGC-TTTTTGCACTTCGCTTCCAGATCAGCGATATC 56420
Query 138470 TATGTTGCCATCA---TCATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGC 138526
| ||| ||| | ||||||||||| | ||||| ||| ||||||||| | ||
Sbjct 56421 CAAGTTCCCAGTAGTGGTATCACACTTGATAGGAACAACACGCATACCTGCCATGGCAGC 56480
Query 138527 ACTAGCAGGATTAGTTCCATGTGCTGACTCTGGTATCAGACA 138568
||||| || ||||| || || || | || |||| |||
Sbjct 56481 CGAGGCAGGGTTGGTTCCGTGGGCAGAGACAGGAATCAAACA 56522
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578992515928760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |