Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20harringtonii_20[genbank_20GCA_5F002018265.1_202017- 03-03] 813 sequences; 26,062,404 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq806 95.1 4e-14 seq298 93.3 1e-13 >seq806 Length=75767 Score = 95.1 bits (104), Expect = 4e-14 Identities = 76/92 (83%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 251482 GATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCG 251541 || || |||| | ||||| ||||||||||||||||||||| ||||| |||||||| ||| Sbjct 27470 GAGGCTCCGTAGGCAATCAAACAATCACGCTCCATTTCACCCAAACGCAGACCACCCTCG 27411 Query 251542 CGAGCCCTACCCTCGGCAGGCTGACGAGTGAG 251573 || | ||||||||||| ||||| || || || Sbjct 27410 CGCGACCTACCCTCGGTGGGCTGGCGGGTCAG 27379 >seq298 Length=22882 Score = 93.3 bits (102), Expect = 1e-13 Identities = 119/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 251407 ATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGA 251466 || |||||||| | | ||| | || || | | | ||||| || | ||| | | ||| Sbjct 1411 ATCAGACCACAAATCTCACAAATGTGCACTCGGAAGGCATCCGAAACCTCAAACAACCGC 1470 Query 251467 CCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAA 251526 |||| ||| | |||||| || | ||||||||||||||| |||||||| |||||| Sbjct 1471 TCCTTCAAGAACGCCGCTGCACCATGGGCAATCATACAATCACGTTCCATTTCTCCGAAA 1530 Query 251527 CGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGT 251570 || | ||||||||| ||||| | |||||| | ||||| || || Sbjct 1531 CGCAAACCACCATCACGAGCACGACCCTCAACCGGCTGTCGTGT 1574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471802268719981