Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20harringtonii_20[genbank_20GCA_5F002018265.1_202017-
03-03] 813 sequences; 26,062,404 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq806 95.1 4e-14
seq298 93.3 1e-13
>seq806
Length=75767
Score = 95.1 bits (104), Expect = 4e-14
Identities = 76/92 (83%), Gaps = 0/92 (0%)
Strand=Plus/Minus
Query 251482 GATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCG 251541
|| || |||| | ||||| ||||||||||||||||||||| ||||| |||||||| |||
Sbjct 27470 GAGGCTCCGTAGGCAATCAAACAATCACGCTCCATTTCACCCAAACGCAGACCACCCTCG 27411
Query 251542 CGAGCCCTACCCTCGGCAGGCTGACGAGTGAG 251573
|| | ||||||||||| ||||| || || ||
Sbjct 27410 CGCGACCTACCCTCGGTGGGCTGGCGGGTCAG 27379
>seq298
Length=22882
Score = 93.3 bits (102), Expect = 1e-13
Identities = 119/164 (73%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 251407 ATAAGACCACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGA 251466
|| |||||||| | | ||| | || || | | | ||||| || | ||| | | |||
Sbjct 1411 ATCAGACCACAAATCTCACAAATGTGCACTCGGAAGGCATCCGAAACCTCAAACAACCGC 1470
Query 251467 CCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAA 251526
|||| ||| | |||||| || | ||||||||||||||| |||||||| ||||||
Sbjct 1471 TCCTTCAAGAACGCCGCTGCACCATGGGCAATCATACAATCACGTTCCATTTCTCCGAAA 1530
Query 251527 CGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGT 251570
|| | ||||||||| ||||| | |||||| | ||||| || ||
Sbjct 1531 CGCAAACCACCATCACGAGCACGACCCTCAACCGGCTGTCGTGT 1574
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471802268719981
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |