Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20harringtonii_20[genbank_20GCA_5F002018265.1_202017- 03-03] 813 sequences; 26,062,404 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq206 87.8 1e-11 >seq206 Length=30920 Score = 87.8 bits (96), Expect = 1e-11 Identities = 105/139 (76%), Gaps = 8/139 (6%) Strand=Plus/Minus Query 435133 GAATTTTTCTTCCAAGTAATGGCTGGTCGTGAAGGTATTATTAATACAGCTATTAAAACT 435192 |||||||| ||||| | |||||||||||||||||| | ||| | || ||| | ||||| Sbjct 4382 GAATTTTTTTTCCATGCCATGGCTGGTCGTGAAGGTCTCATTGACACTGCTGTGAAAACA 4323 Query 435193 GCTGATACTGGTTATATTCAAAGAAAACTTGTCAAGATGCTT--GAAGATATTAAA--CA 435248 ||||| |||||||| || ||| | || ||||| |||| |||||| ||| || Sbjct 4322 GCTGAAACTGGTTACATCCAACGTCGTCTGGTCAAA--GCTTTGGAAGATGTTAGCGCCA 4265 Query 435249 AGAATATGATGGTACAGTG 435267 || ||||||||||| ||| Sbjct 4264 AG--TATGATGGTACTGTG 4248 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740590485135738