Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20harringtonii_20[genbank_20GCA_5F002018265.1_202017-
03-03] 813 sequences; 26,062,404 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq734 89.7 1e-12
>seq734
Length=84471
Score = 89.7 bits (98), Expect = 1e-12
Identities = 102/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
||||| || || || || || ||| |||||| || | || || ||||| ||||||
Sbjct 21817 AAGATCCAGGACAAGGAGGGTATTCCCCCGGACCAGCAGCGTCTCATTTTCGCTGGAAAG 21758
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
||| | || ||||| | || | |||| ||||| |||||||||| ||||||||||||
Sbjct 21757 CAGCTTGAGGATGGCCGCACCCTATCCGACTACAATATCCAGAAAGAATCTACTCTTCAC 21698
Query 206374 CTTGTTTTGAGACTTCG 206390
||||||||| | || ||
Sbjct 21697 CTTGTTTTGCGTCTACG 21681
Score = 89.7 bits (98), Expect = 1e-12
Identities = 82/104 (79%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811
|| || | ||||||||||||||||||||| |||||||||| ||| ||||| | | ||
Sbjct 21681 CGTAGACGCAAAACAAGGTGAAGAGTAGATTCTTTCTGGATATTGTAGTCGGATAGGGTG 21740
Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855
| ||||| || ||||||||||| ||||| || || || || ||
Sbjct 21741 CGGCCATCCTCAAGCTGCTTTCCAGCGAAAATGAGACGCTGCTG 21784
Score = 86.0 bits (94), Expect = 1e-11
Identities = 101/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313
||||| || || || || || ||| |||||| || | || || || || ||||||
Sbjct 21589 AAGATCCAGGACAAGGAGGGTATTCCCCCGGACCAGCAGCGTCTCATTTTTGCTGGAAAG 21530
Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373
|| | || ||||| | || | |||| |||||| ||||||| |||||||||||||||
Sbjct 21529 CAACTTGAGGATGGCCGCACCCTATCCGACTACAACATCCAGAAGGAGTCTACTCTTCAC 21470
Query 206374 CTTGTTTTGAGACTTCG 206390
||||||||| | || ||
Sbjct 21469 CTTGTTTTGCGTCTACG 21453
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181808489489773
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |