Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20harringtonii_20[genbank_20GCA_5F002018265.1_202017- 03-03] 813 sequences; 26,062,404 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq734 89.7 1e-12 >seq734 Length=84471 Score = 89.7 bits (98), Expect = 1e-12 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| || || || || || ||| |||||| || | || || ||||| |||||| Sbjct 21817 AAGATCCAGGACAAGGAGGGTATTCCCCCGGACCAGCAGCGTCTCATTTTCGCTGGAAAG 21758 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 ||| | || ||||| | || | |||| ||||| |||||||||| |||||||||||| Sbjct 21757 CAGCTTGAGGATGGCCGCACCCTATCCGACTACAATATCCAGAAAGAATCTACTCTTCAC 21698 Query 206374 CTTGTTTTGAGACTTCG 206390 ||||||||| | || || Sbjct 21697 CTTGTTTTGCGTCTACG 21681 Score = 89.7 bits (98), Expect = 1e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 || || | ||||||||||||||||||||| |||||||||| ||| ||||| | | || Sbjct 21681 CGTAGACGCAAAACAAGGTGAAGAGTAGATTCTTTCTGGATATTGTAGTCGGATAGGGTG 21740 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 | ||||| || ||||||||||| ||||| || || || || || Sbjct 21741 CGGCCATCCTCAAGCTGCTTTCCAGCGAAAATGAGACGCTGCTG 21784 Score = 86.0 bits (94), Expect = 1e-11 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 206254 AAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAG 206313 ||||| || || || || || ||| |||||| || | || || || || |||||| Sbjct 21589 AAGATCCAGGACAAGGAGGGTATTCCCCCGGACCAGCAGCGTCTCATTTTTGCTGGAAAG 21530 Query 206314 CAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCAC 206373 || | || ||||| | || | |||| |||||| ||||||| ||||||||||||||| Sbjct 21529 CAACTTGAGGATGGCCGCACCCTATCCGACTACAACATCCAGAAGGAGTCTACTCTTCAC 21470 Query 206374 CTTGTTTTGAGACTTCG 206390 ||||||||| | || || Sbjct 21469 CTTGTTTTGCGTCTACG 21453 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181808489489773