Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20harringtonii_20[genbank_20GCA_5F002018265.1_202017- 03-03] 813 sequences; 26,062,404 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq745 91.5 2e-13 >seq745 Length=84346 Score = 91.5 bits (100), Expect = 2e-13 Identities = 184/271 (68%), Gaps = 4/271 (1%) Strand=Plus/Minus Query 147124 ATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGGGTTCCAGGCCGAGACCACC 147183 ||||||||||||||||||||||| || || ||||||||||| |||| | | Sbjct 49914 ATGTGGCACGGCGGCAGCGCCATCTTCTTCAAATCTGCGGGGTTCCAAGCCGTCATAATG 49855 Query 147184 AGCCGCCTGCTCTCGGGGTTCCTCTTAATCTCTTCGATAACCCACCTCAGCTGGTCCACG 147243 | |||| | | ||||| |||| | | | ||||||| ||| || || || Sbjct 49854 ATACGCCGGTCGTACGGGTTGGTCTTGAGTTTGTGGATAACCTCGGCCAGTTGATCAACA 49795 Query 147244 CCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTACCTGGCCCCAAAGTGCCTCCACTGG 147303 || || ||| |||| |||| | ||||| ||| ||| ||||| || | |||||| Sbjct 49794 CCTTGACCCGTATAGTCTGTCTTGGCATCCACATACTCGGCTCCAAAATGGCGCCACTGA 49735 Query 147304 AAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTG--CGAGAAGCCCGCCCGCTTGA 147361 |||||||| || |||||||| |||||| | | ||| | ||| ||||| | | | Sbjct 49734 AAGCCGTATACAGGCCCCAGATCGCCGACTTCACGGTGGCCTAGA--CCCGCGCTGTCAA 49677 Query 147362 GAAACTCGGGGGACCCGTGGGCGTCCCAGAT 147392 |||||||| | || || | | | ||||| || Sbjct 49676 GAAACTCGCGCGAGCCATTGCCATCCCATAT 49646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583482070303200