Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20harringtonii_20[genbank_20GCA_5F002018265.1_202017- 03-03] 813 sequences; 26,062,404 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq734 120 3e-22 >seq734 Length=84471 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 27020 GCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCT 27079 ||| || |||| ||||| ||||| || | ||||| || |||||||||||||||||| Sbjct 21218 GCCACCACGCAGACGCAAAACCAAGTGAAGAGTAGACTCCTTTTGAATATTGTAGTCGGA 21277 Query 27080 CATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGG 27139 | | |||| | || || ||||| || || ||| ||||||||||||| || ||||| || Sbjct 21278 TAGGGTGCGGCCATCCTCAAGCTGCTTTCCAGCGAAAATGAGACGCTGCTGGTCCGGGGG 21337 Query 27140 CACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAAC 27199 | |||||| || || ||||||| || | | | || | || || | | || || Sbjct 21338 AATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTATCCGAAGACTCCAC 21397 Query 27200 TTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 || || || || | || || || ||||| || || |||||||||||| Sbjct 21398 CTCGAGGGTAATGGTCTTTCCAGTTAGAGTCTTGACGAAGATTTGCATA 21446 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 ||||| || | || | ||||| || || || || ||||||||| | | |||| | Sbjct 21459 CGCAAAACAAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGATAGGGTGCGGCCA 21518 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 || || || || || || || ||||||||||||| || ||||| || | |||||| || Sbjct 21519 TCCTCAAGTTGCTTTCCAGCAAAAATGAGACGCTGCTGGTCCGGGGGAATACCCTCCTTG 21578 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || ||||||| || | | | || | || || | | || ||||| || || || Sbjct 21579 TCCTGGATCTTGGACTTGACGTTGTCAATGGTATCGGATGACTCTACTTCGAGGGTAATG 21638 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 | || || || ||||| || || |||||||||||| Sbjct 21639 GTCTTTCCAGTTAGAGTCTTGACGAAGATTTGCATA 21674 Score = 86.0 bits (94), Expect = 5e-12 Identities = 98/132 (74%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 ||||| || | || | ||||| ||||| || |||||||||||| | | |||| | Sbjct 21687 CGCAAAACAAGGTGAAGAGTAGATTCTTTCTGGATATTGTAGTCGGATAGGGTGCGGCCA 21746 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 || || ||||| || || ||| ||||||||||||| || ||||| || | |||||| || Sbjct 21747 TCCTCAAGCTGCTTTCCAGCGAAAATGAGACGCTGCTGGTCCGGGGGAATACCCTCCTTG 21806 Query 27153 TCGGCGATCTTG 27164 || ||||||| Sbjct 21807 TCCTGGATCTTG 21818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424930189564056