Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20harringtonii_20[genbank_20GCA_5F002018265.1_202017-
03-03] 813 sequences; 26,062,404 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq126 89.7 2e-12
>seq126
Length=40607
Score = 89.7 bits (98), Expect = 2e-12
Identities = 122/169 (72%), Gaps = 1/169 (1%)
Strand=Plus/Minus
Query 443699 CTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTT 443758
||||| | |||| || || ||||| |||| |||||||| | || ||| ||| ||||
Sbjct 38263 CTTCGCCCAGCGCCTGGTAGCTTTCGCTGCTGTCGAAGGCATCTT-TTTCTCGGGTGCTT 38205
Query 443759 TAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACG 443818
| ||||| || |||||| || |||||||| || |||| ||||||||||| ||||
Sbjct 38204 TCGCCTCTATTTTCTGGCTGCGCAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCAAACG 38145
Query 443819 AACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCT 443867
| || || || || |||||| |||| |||||| || || || ||
Sbjct 38144 AGCTTATTTCCCGTGATGAGGGTCTGCACACCGACTTTGCTTGCCTGCT 38096
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1588319454998785
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |