Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20harringtonii_20[genbank_20GCA_5F002018265.1_202017- 03-03] 813 sequences; 26,062,404 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq734 82.4 5e-11 >seq734 Length=84471 Score = 82.4 bits (90), Expect = 5e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 ||||| || ||| |||| ||| ||||| || | ||||| || ||||| || | || Sbjct 21352 GACAAGGAGGGTATTCCCCCGGACCAGCAGCGTCTCATTTTCGCTGGAAAGCAGCTTGAG 21293 Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 || | |||| | | ||||| ||||| || ||||| ||| ||| | || ||||||||| Sbjct 21292 GATGGCCGCACCCTATCCGACTACAATATTCAAAAGGAGTCTACTCTTCACTTGGTTTTG 21233 Query 28003 CGTTTGCGTGGCGGC 28017 ||| ||||||| ||| Sbjct 21232 CGTCTGCGTGGTGGC 21218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355858873959651