Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20harringtonii_20[genbank_20GCA_5F002018265.1_202017-
03-03] 813 sequences; 26,062,404 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq734 95.1 1e-14
>seq734
Length=84471
Score = 95.1 bits (104), Expect = 1e-14
Identities = 152/216 (70%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 39070 CGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCG 39129
|| || ||||| || || || ||| ||||| ||||| || |||| || || || |
Sbjct 21231 CGCAAAACCAAGTGAAGAGTAGACTCCTTTTGAATATTGTAGTCGGATAGGGTGCGGCCA 21290
Query 39130 TCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTG 39189
|| |||||||| || || || || || |||||||||||||| | ||| | | ||| |||
Sbjct 21291 TCCTCAAGCTGCTTTCCAGCGAAAATGAGACGCTGCTGGTCCGGGGGAATACCCTCCTTG 21350
Query 39190 TCCATGATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGAT 39248
||| ||| || |||| ||| | | | ||||| |||||||| || | || ||
Sbjct 21351 TCCTGGATCTTGGACTTGA-CGTTGTCAATGGTATCCGAAGACTCCACCTCGAGGGTAAT 21409
Query 39249 ACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
| ||||| || || || || || |||||||||||
Sbjct 21410 GGTCTTTCCAGTTAGAGTCTTGACGAAGATTTGCAT 21445
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429541343874269
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |