Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20harringtonii_20[genbank_20GCA_5F002018265.1_202017- 03-03] 813 sequences; 26,062,404 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq357 96.9 2e-15 >seq357 Length=115873 Score = 96.9 bits (106), Expect = 2e-15 Identities = 138/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || |||||||||||||| || ||||| ||||| || ||||| || ||||| ||||| ||| Sbjct 6064 AAGATGCAGATTTTCGTCAAGACCCTTACGGGTAAGACGATTACCCTCGAGGTTGAGTCC 6005 Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726 |||||||| | || ||| | || | || ||| ||||| || || | || || || Sbjct 6004 TCGGACACTATCGACAATGTCAAGTC-CAAGATTCAGGACAAGGAGGGCATTCCTCCGGA 5946 Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786 || ||||| | || || || ||||| || ||||| || | ||||| | || || Sbjct 5945 CCAGCAGCGCCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGCACCCTGTCTGACTA 5886 Query 23787 CAACATACAAAA 23798 |||||| || || Sbjct 5885 CAACATTCAGAA 5874 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338006250853004