Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20harringtonii_20[genbank_20GCA_5F002018265.1_202017-
03-03] 813 sequences; 26,062,404 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq160 136 9e-27
seq357 107 5e-18
>seq160
Length=36261
Score = 136 bits (150), Expect = 9e-27
Identities = 158/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||| || | ||||||||||||||| ||||| || || |||| ||||| |||| || |||
Sbjct 3382 ACGTAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGAGT 3441
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| ||||| || |||||||| ||||| ||||| | || || ||||| || ||||| ||
Sbjct 3442 GCGGCCATCCTCAAGCTGCTTGCCAGCAAAGATCAAGCGCTGCTGGTCCGGGGGAATGCC 3501
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||||| |||||||| ||| || ||||| ||||| || | || || || |
Sbjct 3502 CTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATCGTGTCCGAAGACTCGACCTCCAG 3561
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704
|| || ||||| ||||||| || || | |||
Sbjct 3562 GGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 3594
>seq357
Length=115873
Score = 107 bits (118), Expect = 5e-18
Identities = 133/182 (73%), Gaps = 0/182 (0%)
Strand=Plus/Plus
Query 225535 TTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGT 225594
||||| || | || || | ||||| || |||||||| ||||||||||| || || ||
Sbjct 5883 TTGTAGTCAGACAGGGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGATCAGGCGCTGC 5942
Query 225595 TGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCT 225654
||||| || ||||| || |||||||| || ||||| ||| ||| ||||| |||||
Sbjct 5943 TGGTCCGGAGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCGATAGTGTCC 6002
Query 225655 GAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714
|||| || || || | || |||||||| ||||| | || || | ||| | |||||
Sbjct 6003 GAGGACTCAACCTCGAGGGTAATCGTCTTACCCGTAAGGGTCTTGACGAAAATCTGCATC 6062
Query 225715 TT 225716
||
Sbjct 6063 TT 6064
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192518777924222
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |