Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20manginecans_20[genbank_20GCA_5F000712455.1_202014-06- 26] 980 sequences; 31,706,104 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq105 134 3e-26 seq106 93.3 9e-14 >seq105 Length=86313 Score = 134 bits (148), Expect = 3e-26 Identities = 179/249 (72%), Gaps = 0/249 (0%) Strand=Plus/Plus Query 230386 ATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC 230445 ||||| || || || || | | ||| ||||||||| | || ||| | || || | Sbjct 44662 ATCATCACTGATGCCGTCGTGATCGAGAAGGAGTTCCTGACCGAGGCTCTGCCCTGCGGT 44721 Query 230446 CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 230505 || | || ||||||||||| || ||| |||||||| || || || || |||||| | Sbjct 44722 CTGCTAGGAATGAACGCTGATCTGATGAAGCAGTACATTGAGTTTGTTGCTGACCGCCTG 44781 Query 230506 TTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAG 230565 ||||||| || || ||||||| |||||| | | |||||||| | || |||||| Sbjct 44782 CTTGTTGCTCTAGGCAACGAGAAGGTGTACCGTGCCACAAACCCCTTCGACTTCATGGAG 44841 Query 230566 CTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGG 230625 ||| ||||| || ||||| |||||||| || ||||||||| | ||||| |||| | Sbjct 44842 AACATCTCGCTCGGCGGCAAGACTAACTTCTTTGAGAAGCGTGTCGGCGACTACCAGAAG 44901 Query 230626 CCTGGTGTG 230634 |||||||| Sbjct 44902 GCTGGTGTG 44910 >seq106 Length=86074 Score = 93.3 bits (102), Expect = 9e-14 Identities = 245/362 (68%), Gaps = 24/362 (7%) Strand=Plus/Plus Query 319317 ACCCTCGAGGAACCCGGGCTCGGGGAACTTCCACGTGGTCTTCGTCTCGGTAAGGGCGTA 319376 |||||| ||||| |||||||||||||| | || | ||| | | ||| |||| Sbjct 53060 ACCCTCAAGGAAACCGGGCTCGGGGAAGGTGAACTCGATCTCGGAGGCACCAAGTTCGTA 53119 Query 319377 GTA--ACTCG-CTGATTCGGGACGCTTCTTCACGAACTCGGACAGATTTCCCTTGTACTT 319433 ||| ||| | | || ||| | |||||| || ||||||| ||| || || ||| Sbjct 53120 GTATGACTTGGCCGA---GGGGCACTTCTTGACAAACTCGGCCAGGTTACCACGGTAACG 53176 Query 319434 CTTCAGCTTTAGGTTAGGTTCGTAATGGATAATAGAGGTG-CAAACAGCGTCGAGGAACC 319492 ||| ||||| | | | ||||| |||| ||| | | || || || ||| ||||| | Sbjct 53177 CTTAAGCTTGAAGC---GCTCGTAGTGGACAAT-GTGCTGGCAGACGTTGTCAAGGAAGC 53232 Query 319493 CGGAGTCGTGTGACACAATCACGCACGAAACGTCCTTAAGG----TTGATCAGGTATTCA 319548 | |||||||| || || || | | ||| || | |||| ||| |||||| || Sbjct 53233 CAGAGTCGTGAGAGACGATAATG---GAA--GTGC--AAGGAGAGTTGCACAGGTAGTCC 53285 Query 319549 ATCAACCACCTCACGTTAGACACAGAAAGATGGTTGGTCGGCTCGTCAAGAAGCAGTAGC 319608 || |||| | ||||| |||| ||||||||||| ||||||||||||||||| | Sbjct 53286 TCCAGCCACTTGACGTTCTTCACATCCAGATGGTTGGTAGGCTCGTCAAGAAGCAGGATA 53345 Query 319609 TTTGCGTTCAGGAGCATTGCACGTGCA-AGAGCGAGTTTCATTTTCCACCCTCCGGAAAG 319667 | | | || | ||||| ||| ||||| || ||||| ||||| || || ||||| Sbjct 53346 TCAGGAGCCTCGAAAACGGCACG-GCACAGAGCCAGCTTCATCTTCCAACCACCAGAAAG 53404 Query 319668 AG 319669 || Sbjct 53405 AG 53406 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057810717697400