Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20manginecans_20[genbank_20GCA_5F000712455.1_202014-06- 26] 980 sequences; 31,706,104 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq28 98.7 9e-16 >seq28 Length=151797 Score = 98.7 bits (108), Expect = 9e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| ||| |||| || ||||||||||| ||||||||| |||| || || | Sbjct 108550 ATGCAAATCTTCGTCAAGACCTTGACGGGCAAGACCATTACCCTCGAAGTCGAGTCCTCT 108609 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | || | ||| || || ||||| || ||| | ||| ||||| Sbjct 108610 GATACCATTGACAATGTCAAGTCCAAGATCCAGGATAAGGAGGGTATCCCCCCGGATCAG 108669 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || | || || ||||| || || || || || ||| | || || | || ||||| Sbjct 108670 CAGCGTCTCATTTTTGCTGGAAAGCAGCTCGAGGATGGCCGTACCCTGTCGGACTACAAC 108729 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGT 29170 |||||||| ||||||||||||||| |||| Sbjct 108730 ATTCAGAAAGAATCTACTCTTCACTTGGT 108758 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| ||| |||| || ||||||||||| ||||||||| |||| || || | Sbjct 108778 ATGCAAATCTTCGTCAAGACCTTGACGGGCAAGACCATTACCCTCGAAGTCGAGTCCTCT 108837 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | || | ||| || || ||||| || ||| | || || || Sbjct 108838 GATACCATTGACAATGTCAAGTCCAAGATCCAGGATAAGGAGGGTATCCCTCCCGACCAG 108897 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 || | || ||||| || || || || || || ||| | || | |||| ||||| Sbjct 108898 CAGCGTCTCATCTTCGCTGGAAAGCAGCTTGAGGATGGCCGCACCCTCTCCGACTACAAC 108957 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGT 29170 || |||||||| |||||||||||| |||| Sbjct 108958 ATCCAGAAGGAGTCTACTCTTCACTTGGT 108986 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428330884061900