Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20manginecans_20[genbank_20GCA_5F000712455.1_202014-06-
26] 980 sequences; 31,706,104 total letters
Query= NC_001623.1
Length=133894
Score E
Sequences producing significant alignments: (Bits) Value
seq28 98.7 9e-16
>seq28
Length=151797
Score = 98.7 bits (108), Expect = 9e-16
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021
|||||||| ||| |||| || ||||||||||| ||||||||| |||| || || |
Sbjct 108550 ATGCAAATCTTCGTCAAGACCTTGACGGGCAAGACCATTACCCTCGAAGTCGAGTCCTCT 108609
Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081
|| || | | | || | ||| || || ||||| || ||| | ||| |||||
Sbjct 108610 GATACCATTGACAATGTCAAGTCCAAGATCCAGGATAAGGAGGGTATCCCCCCGGATCAG 108669
Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141
|| | || || ||||| || || || || || ||| | || || | || |||||
Sbjct 108670 CAGCGTCTCATTTTTGCTGGAAAGCAGCTCGAGGATGGCCGTACCCTGTCGGACTACAAC 108729
Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGT 29170
|||||||| ||||||||||||||| ||||
Sbjct 108730 ATTCAGAAAGAATCTACTCTTCACTTGGT 108758
Score = 84.2 bits (92), Expect = 2e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021
|||||||| ||| |||| || ||||||||||| ||||||||| |||| || || |
Sbjct 108778 ATGCAAATCTTCGTCAAGACCTTGACGGGCAAGACCATTACCCTCGAAGTCGAGTCCTCT 108837
Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081
|| || | | | || | ||| || || ||||| || ||| | || || ||
Sbjct 108838 GATACCATTGACAATGTCAAGTCCAAGATCCAGGATAAGGAGGGTATCCCTCCCGACCAG 108897
Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141
|| | || ||||| || || || || || || ||| | || | |||| |||||
Sbjct 108898 CAGCGTCTCATCTTCGCTGGAAAGCAGCTTGAGGATGGCCGCACCCTCTCCGACTACAAC 108957
Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGT 29170
|| |||||||| |||||||||||| ||||
Sbjct 108958 ATCCAGAAGGAGTCTACTCTTCACTTGGT 108986
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 428330884061900
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |