Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20manginecans_20[genbank_20GCA_5F000712455.1_202014-06-
26] 980 sequences; 31,706,104 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq3 98.7 1e-15
>seq3
Length=270739
Score = 98.7 bits (108), Expect = 1e-15
Identities = 209/306 (68%), Gaps = 6/306 (2%)
Strand=Plus/Minus
Query 145870 ACGTAGAACTG-GCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGG 145928
|| |||||||| ||| | | |||||| || ||||| ||||| || ||||| ||
Sbjct 145554 ACATAGAACTGCGCAAAC-ATGTGGCACGGTGGCAGCGCCATCTTCTTCAAATCCGCAGG 145496
Query 145929 GTTCCAGGCGGTGAGGACGAGCCTCCTGCTC-TCGGGGTTCCTCTTGATCTCCCCTATCA 145987
|||||| ||||| | | || | || | || | ||||| |||||| | || |
Sbjct 145495 GTTCCAAGCGGTCATAATGATACGCC-GATCGTACGGGTTGGTCTTGAGTTTGTGGATGA 145437
Query 145988 GGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGG 146047
|| ||||| || || || || ||| || |||||||||| ||||| ||| |||
Sbjct 145436 CTTCAGCCAGCTGATCAACACCTTGACCCGTATAGTCTGTCTTGGCATCCACATACTCGG 145377
Query 146048 CCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCC 146107
| ||||| || | |||||| || ||||| || ||||| || || || || | ||| |
Sbjct 145376 CTCCGAAATGGCGCCACTGAAAGCCGTATACAGGCCCTAGATCGCCAACTTCACGGTGGC 145317
Query 146108 CCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC-- 146165
| || || || | || || || || || |||||| | |||||||||||||| ||
Sbjct 145316 CTAGACCCGCGTTATCAAGAAACTCGCGCGAGCCGTTGCCATCCCAGATCTTGACACCAG 145257
Query 146166 CCTCGC 146171
||||||
Sbjct 145256 CCTCGC 145251
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590069571559200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |