Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20manginecans_20[genbank_20GCA_5F000712455.1_202014-06- 26] 980 sequences; 31,706,104 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq116 257 1e-63 seq105 161 9e-35 seq100 105 6e-18 seq28 89.7 5e-13 >seq116 Length=83673 Score = 257 bits (284), Expect = 1e-63 Identities = 632/951 (66%), Gaps = 8/951 (1%) Strand=Plus/Plus Query 23027 GAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACAT 23086 || || || ||||| || || ||||| || || |||||| | ||| || || || Sbjct 76180 GATGCTAGGTTGCACACAGCGACCTCATCAGGGGCACAGTACTCGATAATCTCAGTGCAC 76239 Query 23087 AGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCC 23146 || || || || || || | ||| |||| ||||| || || ||||| || Sbjct 76240 AGGTTCGAACTGCGAATGGTACCTAGATTTTTCTGATTGCTCTTGCGGTTGCAGTGGTCT 76299 Query 23147 TTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATA 23206 ||||||||||| | || |||| ||||| ||| | ||| | || || ||||| Sbjct 76300 TTGTAGAGCATAAAAGGGTTGCCAGTCTCAGTCTGAGCCTCCAGAATGGCATACCACAGT 76359 Query 23207 GTCTGAGCGTGAACA--CGT-CGCACGTACCTGCCTTCTTCCTCGTACTTTTGGTACAAC 23263 |||| || | ||| | | || || | ||| |||| |||||||||| |||| Sbjct 76360 TTCTGGGCCTTGACAACCATGCGACCGCGAC--CCTCCTTC-TCGTACTTTTCATACAGA 76416 Query 23264 GCGTCAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGA 23323 || ||||| || | || || || || |||| |||||| ||| | || ||||||||| Sbjct 76417 GCCTCAAACTCTTCGCCATAGCAATCCGCCAAGCCGGGGCATTCATTGGGGCACATGAGA 76476 Query 23324 CTCCACAT-TGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTA 23382 |||| | | || || ||||| || |||| || | || ||||| || || | Sbjct 76477 GTCCAGTCCTCATTC-TTCTCAACACGCTTCATGAACAAGTCGCAGATCCACAGGGCCAA 76535 Query 23383 GAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTC 23442 ||| || || || || || || || || || ||| |||||| || || | || || Sbjct 76536 GAATAGGTCACGAGCACGGACTTCTTCCTTTCCGTGGTTCTTGCGTAAGTCGAGGAACTC 76595 Query 23443 CAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCC 23502 || || || |||||||| |||||||| |||| |||||| || || |||| ||| || || Sbjct 76596 GAAGACATCAGCATGCCATGGCTCGAGATAAATGGCAAAGGCTCCAGGTCGCTTGTTTCC 76655 Query 23503 GCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTT 23562 ||||| || || |||||||| ||||||||| | || | |||||| || |||| ||||| Sbjct 76656 ACCCTGGTCAACATAACGGGCGGTGTTGTTGAAAACACGTAGCATGGGAACGATGCCGTT 76715 Query 23563 GGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAA 23622 || | ||| ||| || | || || | || |||| |||||| | || Sbjct 76716 CGAAGTACCGTTAGTGCCAGCAATGTAAGAGCCAGTGGCACGAATACGGTGAACATTGAG 76775 Query 23623 ACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCC 23682 ||| || || || || || || ||||| || || || || || ||||| ||||| Sbjct 76776 ACCGATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCGTAAATGCC 76835 Query 23683 CTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGT 23742 |||||||||||| || || | |||| | |||||| ||||||| || || | ||| || Sbjct 76836 CTCGATGCTGTCATCCTTCATGTCGACTAGGAAACATGAAGACAACTGAGCCTGGGGAGT 76895 Query 23743 AGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTA 23802 | |||| || || || || ||||| || ||| | | ||||| || ||||| Sbjct 76896 ACCGGCATTAAAGAGCGTAGGTGATGCGTGAGTGAAGAACTTGCTAGACATAAGGTTGTA 76955 Query 23803 CGTGTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCAT 23862 || || | | ||| | | || || ||||| | || || ||||| ||||| Sbjct 76956 GGTTTCAAGCACACGATCGACTTTGTCACCCCAAATACCCACAGCAACACGCATTATCAT 77015 Query 23863 GTATTGAGGTCTCTCGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGT 23922 || || || | ||| || | || | || ||||| || || ||||| | | ||| Sbjct 77016 GTGCTGGGGACGCTCAACAATCTTACCATCAAGTTTGAGTAGGTACGAACGCTCGAGCGT 77075 Query 23923 TTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGA 23973 ||||| ||||| || | ||||| |||||||| |||| ||| ||||| || Sbjct 77076 CTTAAAGCCAAAGTACTGGTAGTTGAAGTCACGGTCGTACACAATGGCAGA 77126 Score = 116 bits (128), Expect = 3e-21 Identities = 168/232 (72%), Gaps = 9/232 (4%) Strand=Plus/Plus Query 22452 GGTTCACCACTTGAAACTCGCCGGACAAGA-CGCGGCGTTGGTAAATGTTGGATGTGAAC 22510 |||| || || || |||||||| | ||||| ||||||| |||||||||||||||||| | Sbjct 75605 GGTTGACGACCTGGAACTCGCCAG-CAAGAACGCGGCGCTGGTAAATGTTGGATGTGTAG 75663 Query 22511 GGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCC 22570 |||||||| | |||||||| ||||| ||||| | || || || ||||| || || Sbjct 75664 GGTTCGAAGCACTCATTGTTGCCCAGAATCTGCGACGTGCTGGCTGTAGGCATGGGTGCA 75723 Query 22571 AACAGTAGCGAGTTTCTCAAGCCGTGCT--TTGAAATTTTACTCTTGAGCATCGACCAGT 22628 | || || || || | | || |||| || | || | || | ||| | | ||||| Sbjct 75724 ACTAGAAGAGAATTGCGTACACCATGCTGCTTAATCTTCTCCTTTAGAGAA--GTCCAGT 75781 Query 22629 CCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCC 22680 |||||||||| || |||||| ||||||||||| | ||||| | ||| Sbjct 75782 CCCACAGATCACTAGGAGTCACA---TCCCACATATCAAACTGCAAGATGCC 75830 >seq105 Length=86313 Score = 161 bits (178), Expect = 9e-35 Identities = 483/734 (66%), Gaps = 25/734 (3%) Strand=Plus/Plus Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629 || ||| | |||||||| ||||| || || || || ||||| | || || | || ||| Sbjct 44053 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCCTTCTGGACTGCTGAGGAGATTGATCTG 44112 Query 57630 TCTAAGGATCTGAGCGATTGGGATTCCC---TCAAAGAATCTGAGAGAAATTTTATTAAA 57686 ||||||||||| ||| ||| | || | || || ||| | || || Sbjct 44113 TCTAAGGATCTCCACGACTGGAACAACCGTCTGAACAAAGACGAGCAGTACTTCATCTCC 44172 Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746 ||| | | || || || || || || ||||| || || ||||| ||| | || || | Sbjct 44173 CACATTCTTGCCTTCTTTGCTGCCTCTGATGGCATCGTCAACGAAAATCTCGTTGAGCGC 44232 Query 57747 TTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATT 57806 || ||| || ||||| | | ||||| | ||||| ||||| || || | || Sbjct 44233 TTCTCAGGCGAGGTGCAGATCCCCGAGGCCCGCTGCTTCTACGGTTTCCAGATCATGATG 44292 Query 57807 GAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGA--CAACG 57864 |||||| | || || |||| || ||||| || || || || ||| | ||||| | || Sbjct 44293 GAAAACATCCACTCTGAAACCTACTCGCTGCTGATTGACACCTACATCAAGGAGCCCTCG 44352 Query 57865 ACGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAG 57924 | | | | || |||||||| || || || || || ||| ||| | ||||| | Sbjct 44353 CAGCGCA-CATAC-CTGTTCAATGCCATTGACACTATTCCCTGCATCCGCCGCAAGGCCG 44410 Query 57925 AGTGGTCAATCAAATGGATAAAAAGCGCCACGG---CCACGTTCGCCGAGAGGCTAATCG 57981 | ||| | | || ||||| | || || || | ||||| ||| || | ||| | | Sbjct 44411 ACTGGGCTCTGAAGTGGATCAC---CGACAAGGAGTCGACGTTTGCCCAGCGCCTAGTTG 44467 Query 57982 CGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGA 58041 | || || || ||||| || || || || || ||| ||| || | || || ||| | Sbjct 44468 CCTTTGCTGCTGTCGAGGGCATCTTTTTCTCAGGCGCCTTCGCCTCCATCTTCTGGCTCC 44527 Query 58042 AGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGG 58101 || || || || ||||| || ||||| || |||||| | || || || || |||| Sbjct 44528 GCAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCAAACGAGCTTATTTCTCGTGATGAGG 44587 Query 58102 GTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCGACGCGGG 58161 | || || || || ||||| ||||| ||| ||| || | | || || ||| | | | Sbjct 44588 GCCTGCACACCGACTTTGCTTGCCTGCTGTTCTCGCA---TCTGAACAA-CCGCCCCAGC 44643 Query 58162 ATCGCATCTTGGACA-----TTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCAC 58216 | | | |||| || | ||||| || || |||| |||||| || ||||| | || Sbjct 44644 AAGG-ACCTTGTGCAAAAGATCATCACTGATGCCGTCGTGATCGAGAAGGAGTTCCTGAC 44702 Query 58217 CGAAGCCCTACCG-GTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTG 58275 ||| || || || | || | |||| || |||||| |||| ||||| ||||||||| Sbjct 44703 CGAGGCTCTGCCCTGCGGTC-TGCTAGGAATGAACGCTGATCTGATGAAGCAGTACATTG 44761 Query 58276 AGTTTGTTGCCGAC 58289 |||||||||| ||| Sbjct 44762 AGTTTGTTGCTGAC 44775 >seq100 Length=89839 Score = 105 bits (116), Expect = 6e-18 Identities = 118/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||| |||||||| ||||| || || || || ||||| ||| |||| ||||| | Sbjct 17019 AAGATGCAGATTTTCGTCAAGACCCTTACGGGTAAGACGATTACCCTCGAGGTTGAGTCC 17078 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 || |||| | |||| | ||||| | || ||||||||| ||| | || || ||| Sbjct 17079 TCGGACACTATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCCCCGGAC 17138 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 |||||||| || || ||||||||||| ||| |||| || Sbjct 17139 CAGCAGCGCCTGATCTTCGCTGGCAAGCAGCTGGAGGA 17176 >seq28 Length=151797 Score = 89.7 bits (98), Expect = 5e-13 Identities = 150/217 (69%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 31205 GTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCGAA 31264 || ||||| || || || || || || ||| |||| || || | ||||||| | || Sbjct 108334 GTCAAGACCCTTACCGGAAAGACCATTACCCTCGAAGTCGAGTCCTCCGACACCATTGAC 108393 Query 31265 ACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATA 31324 | ||||| | || ||||||||| ||| | || || |||||||||||||| || Sbjct 108394 AACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAGCAGCGTCTCATC 108453 Query 31325 TTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAGAA 31384 |||||||| || ||| | || || || | ||| || |||||||| |||||| Sbjct 108454 TTCGCTGGAAAGCAGCTTGAGGATGGCCGTACCCTTTCCGACTACAACATTCAGAAAGAA 108513 Query 31385 TCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || |||||||| |||| || | ||| | || |||| Sbjct 108514 TCTACTCTTCACTTGGTCCTGCGTCTGCGTGGTGGTA 108550 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| ||||| |||| ||||| || || ||| |||| || || | || Sbjct 108550 ATGCAAATCTTCGTCAAGACCTTGACGGGCAAGACCATTACCCTCGAAGTCGAGTCCTCT 108609 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | || | ||||| | || ||| ||||| || | || || || ||| Sbjct 108610 GATACCATTGACAATGTCAAGTCCAAGATCCAGGATAAGGAGGGTATCCCCCCGGATCAG 108669 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || || ||||| || ||| | || || || || || || ||| Sbjct 108670 CAGCGTCTCATTTTTGCTGGAAAGCAGCTCGAGGATGGCCGTACCCTGTCGGACTACAAC 108729 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| |||||||| |||||||| |||| || | ||| | || |||| Sbjct 108730 ATTCAGAAAGAATCTACTCTTCACTTGGTTCTGCGTCTGCGTGGTGGTA 108778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445760939361600