Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20manginecans_20[genbank_20GCA_5F000712455.1_202014-06- 26] 980 sequences; 31,706,104 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq116 87.8 2e-12 >seq116 Length=83673 Score = 87.8 bits (96), Expect = 2e-12 Identities = 210/317 (66%), Gaps = 3/317 (1%) Strand=Plus/Plus Query 64827 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 64886 |||| ||| | |||||||| || || || | || | | |||||||| |||||||| Sbjct 75256 TCCTGGTCTACAGTGAATTGGATAGGTGCAGCAGCAGCCTGCGTACGTAAGTAGTACATG 75315 Query 64887 CCCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTC 64946 ||||| || ||||| || |||| || ||| ||||| || || | ||| | Sbjct 75316 CCCGTCTTGAGACCTAGTTTCCAGCCAGCAAAGTGCATGCTGGTGATCTTGCCCATGGTA 75375 Query 64947 GGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 65006 |||||| || || || || | ||| || ||| || ||||| || || | || ||| Sbjct 75376 GGATCTTTCATGTGAATGTTTAGAGACTGCGATTGGTCAATGAAAGCACCACGATCAGCA 75435 Query 65007 GCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATA 65066 ||||||| | | || || | ||| ||||||| || || || | |||||| Sbjct 75436 GCCATTTGCACAACTGTACGCTGGGAAATCTCCCAAACGGTCTTGTACAGAGCTTTAATA 75495 Query 65067 TCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTG 65123 || | |||| | | | | ||||||||||| ||| || || ||||| | |||||| Sbjct 75496 TCAGCAGGAATGCTAGAGATGTTCTGAATGGAGCCATTGTCCGCAATAATGCGATTCTTC 75555 Query 65124 ATCTCATCATTCCATAA 65140 || | ||| |||||| Sbjct 75556 ATATTGTCAGACCATAA 75572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658164737383200