Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20manginecans_20[genbank_20GCA_5F000712455.1_202014-06- 26] 980 sequences; 31,706,104 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq116 187 4e-42 seq105 134 2e-26 >seq116 Length=83673 Score = 187 bits (206), Expect = 4e-42 Identities = 1327/2111 (63%), Gaps = 49/2111 (2%) Strand=Plus/Plus Query 78706 TCCTTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATT 78765 |||| ||| | |||||||| || || || | || | | |||||||| |||||||| Sbjct 75256 TCCTGGTCTACAGTGAATTGGATAGGTGCAGCAGCAGCCTGCGTACGTAAGTAGTACATG 75315 Query 78766 CCCGTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTC 78825 ||||| || ||||| || |||| || || ||||| || || | ||| | Sbjct 75316 CCCGTCTTGAGACCTAGTTTCCAGCCAGCAAAGTGCATGCTGGTGATCTTGCCCATGGTA 75375 Query 78826 GGATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 78885 |||||| || || || || | ||| || ||| || ||||| || || | || ||| Sbjct 75376 GGATCTTTCATGTGAATGTTTAGAGACTGCGATTGGTCAATGAAAGCACCACGATCAGCA 75435 Query 78886 GCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATA 78945 ||||||| | | || || | ||| ||||||| || || || | |||||| Sbjct 75436 GCCATTTGCACAACTGTACGCTGGGAAATCTCCCAAACGGTCTTGTACAGAGCTTTAATA 75495 Query 78946 TCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTG 79002 || | |||| | | | | ||||||||||| ||| || || ||||| | |||||| Sbjct 75496 TCAGCAGGAATGCTAGAGATGTTCTGAATGGAGCCATTGTCCGCAATAATGCGATTCTTC 75555 Query 79003 ATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACT 79062 || | ||| |||||| ||| || | | ||||| || || || || Sbjct 75556 ATATTGTCAGACCATAAACCAAGATCGACTAGGTCACGTAGGAGCCAGGGGTTGACGACC 75615 Query 79063 TGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGAT 79122 || || || |||| | || | || |||||| || || || ||||| | | Sbjct 75616 TGGAACTCGCCAGCAAGAACGCGGCGCTGGTAAATGTTGGATGTGTAGGGTTCGAAGCAC 75675 Query 79123 TCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTA 79182 ||||| || |||| ||| || | || || || ||||| ||||| || | | | | Sbjct 75676 TCATTGTTGCCCAGAATCTGCGACGTGCTGGCTGTAGGCATGGGTGCAACTAGAAGAGAA 75735 Query 79183 TTTCTAAGACCGTA-TGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGA 79241 || | | ||| | || | | || || || |||||||| ||| ||||| |||||| Sbjct 75736 TTGCGTACACCATGCTGCT-TAATCTTCTCCTTTAGAGAAGTCCAGTCCCACAGATCACT 75794 Query 79242 CGGGACAACATTCCAAAGATCATATTGTAGAATACCGTTACTAG-CGTATGATCCTGTGT 79300 || |||| ||| | |||| | || | || || || || | || || | Sbjct 75795 AGGAGTCACATCCCACATATCAAACTGCAAGATGCC-TTGGGAGACAGGAGAACCCTCAT 75853 Query 79301 ATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAAT 79360 | ||| |||| || ||| | | ||| | ||| || || ||| ||| | Sbjct 75854 AAGTTGAGTAAGTACCCTCCGTCTGGGCGATTTCCATTGAAGCAGTTAGTGCGGCGTGGT 75913 Query 79361 AAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAAT 79420 | |||||||| ||||||| ||| ||||| | ||||||| || ||||| || | Sbjct 75914 AGATGGTTTCAAAAATCTGCTTGTTGAGCTGGCGTGCTTCAGGGGATTCAAAAGGC-ATG 75972 Query 79421 TTAAGAG-AATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTC 79479 |||| || || ||||| || | || || ||||| | ||| || || | || | | Sbjct 75973 CGGAGAGCAAGGAAAGCGTCAGCCAGGCCCTGTACACCGACACCAATGGGACGGTGGCGC 76032 Query 79480 TTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGA 79539 | || | | |||||| | | ||| || | ||| | ||| || || || || Sbjct 76033 ATGTTGCTGTTGTGAGCTTCCTGGACAGGGTAGTGATTCACATCGATGATGCGGTTTAGG 76092 Query 79540 TTCCTGACTATTACTTTGACCACATCCTTTAGTTTGAGAAAATCAAA-TCGTCCATCTAT 79598 || | || | |||| | || || | ||| || ||| ||| | || || | | Sbjct 76093 TTGCGAACAACAACTTGGGTGACTTCGTGTAGCTTTTTAAAGTCATACTCACCCTTGTTG 76152 Query 79599 TA-----CAAACATGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCA 79653 || | || | || | |||||| || || || || || ||||||| || Sbjct 76153 TAGTCCACGAAGGAAGGAAGGGCTAGAGATGCTAGGTTGCACACAGCGACCTCATCAGGG 76212 Query 79654 TCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGT 79713 | || | || || |||||||| ||||| || |||||| |||| ||||| Sbjct 76213 GCACAGTACTCGATAATCTCAGTGCACAGGTTCGAACTGCGAATGGTACCTAGATTTTTC 76272 Query 79714 TGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATC 79773 ||||| ||||| ||| || || || || || || || || | ||||| ||| || Sbjct 76273 TGATTGCTCTTGCGGTTGCAGTGGTCTTTGTAGAGCATAAAAGGGTTGCCAGTCTCAGTC 76332 Query 79774 TGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCTTTATTATAGACTTGT-ATCTCT 79831 |||| || | ||| || | ||| | | || | ||||| | | | || | | | Sbjct 76333 TGAGCCTCCAGAATGGCATACCACA-GTTTCTGGGCCTTGACAAC---CATGCGACCGCG 76388 Query 79832 TTTCTCTTTC--GTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAA 79889 ||| ||| ||| | | ||| | || ||||| || || | ||| | || Sbjct 76389 ACCCTCCTTCTCGTACTTTTCATACAGAGCCTCAAACTCTTCGCCATAGCAATCCGCCAA 76448 Query 79890 TCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCAT 79949 || || ||||| | || ||||| | | ||| || ||| | || || || ||||| Sbjct 76449 GCCGGGGCATTCATTGGGGCACATGAGAGTCCAGTCCTCATTCTTCTCAACACGCTTCAT 76508 Query 79950 AAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCC 80009 || | || ||||| || || | ||||| || | | | || || ||||| Sbjct 76509 GAACAAGTCGCAGATCCACAGGGCCAAGAATAGGTCACGAGCACGGACTTCTTCCTTTCC 76568 Query 80010 TGTATTCTTTT-TAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATA 80068 ||||| |||| ||||||||| | | | ||||| |||||| || || | || | Sbjct 76569 GTGGTTCTTGCGTAAG-TCGAGGAACTCGAAGACATCAGCATGCCATGGCTCGAGATAAA 76627 Query 80069 TGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTAT 80128 |||| | |||| ||||| |||||||| ||||| || | || | |||||||| || Sbjct 76628 TGGCAAAGGCTCCAGGTCGCTTGTTTCCACCCTGGTCAACATAACGGGCGGTGTTGTTGA 76687 Query 80129 AAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTC 80188 |||| | | ||| |||| || || || || ||||| || || || | || || | Sbjct 76688 AAACACGTAGCATGGGAACGATGCCGTTCGAAGTACCGTTAGTGCCAGCAATGTAAGAGC 76747 Query 80189 CACTGGCACGAATA--TTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAA 80246 || ||||||||||| | |||| ||||| || || || ||||| || || || | Sbjct 76748 CAGTGGCACGAATACGGTGAACATTG--AGACCGATACCACCAGCCATCTTGGAAATCAT 76805 Query 80247 TGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAG 80306 || || || | ||||| || |||||||| ||||| ||||| |||||| | ||| Sbjct 76806 GGCACAAGTCTTGAGGGTATCGTAAATGCCCTCGATGCTGTCATCCTTCATGTCGACTAG 76865 Query 80307 AAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTG 80366 ||||| ||||| || | ||| || |||||||| | ||||| || ||||| Sbjct 76866 GAAACATGAAGACAACTGAGCCTGGGGAGTACCGGCATTAAAGAGCGTAGGTGATGCGTG 76925 Query 80367 CGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAA-TAGCTGAT--TCTAT---ATC 80420 || || | || ||||| || ||||| || |||| | ||| || | | | Sbjct 76926 AGTGAAGAACTTGCTAGACATAAGGTTGTAGGTTTCAAGCACACGATCGACTTTGTCACC 76985 Query 80421 CCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTT 80480 ||| ||| || || || |||||||||| ||||||||| || | ||||| ||||| Sbjct 76986 CCA------AATACCCACAGCAACACGCATTATCATGTGCTGGGGACGCTCAACAATCTT 77039 Query 80481 GTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGA 80540 || | ||| | | ||| || || | || ||||| ||||| || | ||| Sbjct 77040 ACCATCAAGTTTGAGTAGGTACGAACGCTCGAGCGTCTTAAAGCCAAAGTACTGGTAGTT 77099 Query 80541 AAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATC 80600 ||||| || ||||| | ||| | |||| || | |||||| | ||| | || Sbjct 77100 GAAGTCACGGTCGTACACAATGGCAGAGTCCAGCTCATCCTTGTGACGCATAA-TGCACT 77158 Query 80601 CATGGTGATACTT--GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTG 80658 ||| || ||| || || || || || ||| | || || |||||||||| | Sbjct 77159 CAT-ATGTCTCTTTGGAGATCATAGGGGAGGCTTTACGGTTCGCGGGGTTAACATAGTGG 77217 Query 80659 AATAAATCCTCCATCACTTCACTA-AATAGtttttttGTTTCCTTGTGTAGATTTGATAC 80717 | | || || ||| || | || | || || |||| |||||| ||||| || || Sbjct 77218 TAAAGGTCAGACACCAC-CGACGACCATTGCTTCTTGGTTTGCTTGTGGAGATTAGAGAC 77276 Query 80718 GGCTATTCTGGCGGCTAAAATGGCATAATCTGGATGTTGTGTAGTACAAGT-GGCTGCTA 80776 || || | |||||| | ||||||||||| ||||| |||| | || || ||| || Sbjct 77277 AGCAATACGGGCGGCCAGGATGGCATAATCGGGATG-TGTGACGGTCATGTAGGCGGCAG 77335 Query 80777 TTTCGGCTGCC 80787 ||||||| ||| Sbjct 77336 TTTCGGCGGCC 77346 >seq105 Length=86313 Score = 134 bits (148), Expect = 2e-26 Identities = 374/570 (66%), Gaps = 14/570 (2%) Strand=Plus/Minus Query 49951 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 50010 |||| || || || || ||| |||||| ||||| || | | ||| || ||||| || Sbjct 44618 AACAGCAGGCAAGCAAAGTCGGTGTGCAGGCCCTCATCACGAGAAATAAGCTCGTTTGAG 44559 Query 50011 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCA 50070 || || || || ||||| || |||||||| ||||| || ||||| || || | || Sbjct 44558 AAGGTCAGACCAGGCATGAGACCACGCTTGCGGAGCCAGAAGATGGAGGCGAAGGCGCCT 44499 Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CG 50127 || || ||||| || || || || ||||||||||| || | || || | | | | Sbjct 44498 GAGAAAAAGATGCCCTCGACAGCAGCAAAGGCAACTAGGCGCTGGGCAAACGTCGACTCC 44439 Query 50128 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCT 50187 |||| |||||||| ||||||| |||||||| | || || || || || Sbjct 44438 TTGTCGGTGATCCACTTCAGAGCCCAGTCGGCCTTGCGGCGGATGCAGGGAATAGTGTCA 44379 Query 50188 ATGGCATTAAAGAGATAGtttttttCATTACTA----TCTTTAACATAAGTATCGATCAA 50243 |||||||| || || || | | | | | | || || | || || || |||| Sbjct 44378 ATGGCATTGAACAGGTA----TGTGCGCTGCGAGGGCTCCTTGATGTAGGTGTCAATCAG 44323 Query 50244 AAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCT 50303 || || |||| || || |||||||| || ||||| || |||||||| || | Sbjct 44322 CAGCGAGTAGGTTTCAGAGTGGATGTTTTCCATCATGATCTGGAAACCGTAGAAGCAGCG 44263 Query 50304 AGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCC 50363 ||||||| |||||||| || | || || ||| | | |||||| || || || || Sbjct 44262 GGCCTCGGGGATCTGCACCTCGCCTGAGAAGCGCTCAACGAGATTTTCGTTGACGATGCC 44203 Query 50364 GTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCG--TTGGGTGTT 50421 ||| ||| ||||| || || | | || || || | | ||| || | | Sbjct 44202 ATCAGAGGCAGCAAAGAAGGCAAGAATGTGGGAGATGAAGTACTGCTCGTCTTTGTTCAG 44143 Query 50422 A-GTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGA 50480 | | || ||||| || | || ||| ||||| | ||| | || || | ||||| || || Sbjct 44142 ACGGTTGTTCCAGTCGTGGAGATCCTTAGACAGATCAATCTCCTCAGCAGTCCAGAAGGA 44083 Query 50481 TGCCTCTGCCTTTTTATACATATTCCAGAT 50510 ||||| ||||| || ||||| | |||||| Sbjct 44082 GGCCTCGGCCTTCTTGTACATCTGCCAGAT 44053 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718260001207200