Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20manginecans_20[genbank_20GCA_5F000712455.1_202014-06-
26] 980 sequences; 31,706,104 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq116 154 2e-32
>seq116
Length=83673
Score = 154 bits (170), Expect = 2e-32
Identities = 741/1157 (64%), Gaps = 32/1157 (3%)
Strand=Plus/Plus
Query 71697 GGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCA---TATTGTATAAT 71753
||| | |||||| || || || || || ||||||| || |||| || | |||||
Sbjct 76173 GGCTAGAGATGCTAGGTTGCACACAGCGACCTCATCAGG---GGCACAGTACTCGATAAT 76229
Query 71754 TTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTT 71813
|||||||| || || || ||||| |||| ||||| ||||| ||||| |||
Sbjct 76230 CTCAGTGCACAGGTTCGAACTGCGAATGGTACCTAGATTTTTCTGATTGCTCTTGCGGTT 76289
Query 71814 ACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGC 71873
|| || || || || ||||| || | ||||| ||| |||||| || | ||| ||
Sbjct 76290 GCAGTGGTCTTTGTAGAGCATAAAAGGGTTGCCAGTCTCAGTCTGAGCCTCCAGAATGGC 76349
Query 71874 TTTCCAGACGACTC-GAGCCTTTATTATATTCTTGT-ATCTCTTTTCTCTTTC--GTATT 71929
| ||| | | || | ||||| | | | || | | | ||| ||| ||| |
Sbjct 76350 ATACCACA-GTTTCTGGGCCTTGACAAC---CATGCGACCGCGACCCTCCTTCTCGTACT 76405
Query 71930 GTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCG 71989
| ||| | || ||||| || || | || | || || || |||||||| |
Sbjct 76406 TTTCATACAGAGCCTCAAACTCTTCGCCATAGCAATCCGCCAAGCCGGGGCATTCATTGG 76465
Query 71990 GACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCC 72049
| ||||| | | ||| || ||| | | || || ||||| || | || ||||
Sbjct 76466 GGCACATGAGAGTCCAGTCCTCATTCTTCTCAACACGCTTCATGAACAAGTCGCAGATCC 76525
Query 72050 AAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTT-TAAGA 72108
| || || | ||||| || | | | || || ||||| ||||| ||||
Sbjct 76526 ACAGGGCCAAGAATAGGTCACGAGCACGGACTTCTTCCTTTCCGTGGTTCTTGCGTAAG- 76584
Query 72109 TCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGC 72168
||||||||| | | | ||||| |||||| || || | || ||||| | |||| ||
Sbjct 76585 TCGAGGAACTCGAAGACATCAGCATGCCATGGCTCGAGATAAATGGCAAAGGCTCCAGGT 76644
Query 72169 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 72228
|| |||||||| ||||| || | || | |||||||| || |||| | | ||| |||
Sbjct 76645 CGCTTGTTTCCACCCTGGTCAACATAACGGGCGGTGTTGTTGAAAACACGTAGCATGGGA 76704
Query 72229 ATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATA--T 72286
| || || || || | ||| || || || | || || ||| |||||||||||
Sbjct 76705 ACGATGCCGTTCGAAGTACCGTTAGTGCCAGCAATGTAAGAGCCAGTGGCACGAATACGG 76764
Query 72287 TGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACG 72346
|| |||| ||||| || || || ||||| || || || | || || || | |
Sbjct 76765 TGAACATTG--AGACCGATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGG 76822
Query 72347 TATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTT 72406
|||| || |||||||| || || |||||| |||||| | ||| ||||| ||||| |
Sbjct 76823 TATCGTAAATGCCCTCGATGCTGTCATCCTTCATGTCGACTAGGAAACATGAAGACAACT 76882
Query 72407 GGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAG 72466
| | ||| || |||||||| | ||||| || ||||| || || | || ||
Sbjct 76883 GAGCCTGGGGAGTACCGGCATTAAAGAGCGTAGGTGATGCGTGAGTGAAGAACTTGCTAG 76942
Query 72467 ACAGTAGATTGTACGTCTCAA-TAGCTGAT--TCTATATCCCATTGATGTATTCCTACCG 72523
||| || ||||| || |||| | ||| || | || | | || || || |
Sbjct 76943 ACATAAGGTTGTAGGTTTCAAGCACACGATCGACTTTGTCACCCCAA---ATACCCACAG 76999
Query 72524 CGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGT 72583
| |||||||||| ||| ||||| || | ||||| ||||| || | ||| | | ||
Sbjct 77000 CAACACGCATTATCATGTGCTGGGGACGCTCAACAATCTTACCATCAAGTTTGAGTAGGT 77059
Query 72584 AGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAA 72643
| || || | || ||||| ||||| || | ||| ||||| || ||||| | ||
Sbjct 77060 ACGAACGCTCGAGCGTCTTAAAGCCAAAGTACTGGTAGTTGAAGTCACGGTCGTACACAA 77119
Query 72644 TAACCGAATTGAGTTTATCCTTATATTTGTTAACTATATCCATGGTGATACTT--GAAAT 72701
| | || | || | |||||| | ||| | | ||| || ||| || ||
Sbjct 77120 TGGCAGAGTCCAGCTCATCCTTGTGACGCATAA-TGCACTCAT-ATGTCTCTTTGGAGAT 77177
Query 72702 AATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTC 72761
|| || || ||| | || || |||||||||| | | | || || |||
Sbjct 77178 CATAGGGGAGGCTTTACGGTTCGCGGGGTTAACATAGTGGTAAAGGTCAGACACCAC-CG 77236
Query 72762 ACTA-AATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAA 72820
|| | || | || || |||| |||||| ||||| || || || || | |||||| || |
Sbjct 77237 ACGACCATTGCTTCTTGGTTTGCTTGTGGAGATTAGAGACAGCAATACGGGCGGCCAGGA 77296
Query 72821 TGGCATAATCTGGATGT 72837
|||||||||| ||||||
Sbjct 77297 TGGCATAATCGGGATGT 77313
Score = 98.7 bits (108), Expect = 1e-15
Identities = 346/537 (64%), Gaps = 5/537 (1%)
Strand=Plus/Plus
Query 70789 TCCTTGTCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATG 70848
|||| ||| | || || || || || | | || || | |||||||| |||||||||
Sbjct 75256 TCCTGGTCTACAGTGAATTGGATAGGTGCAGCAGCAGCCTGCGTACGTAAGTAGTACATG 75315
Query 70849 CCTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTA 70908
|| || || ||||| || |||| || ||| ||||| || || | ||| | ||
Sbjct 75316 CCCGTCTTGAGACCTAGTTTCCAGCCAGCAAAGTGCATGCTGGTGATCTTGCCCATGGTA 75375
Query 70909 GGATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 70968
||||| |||||||| || | ||||| ||| || ||||| || || | || |||
Sbjct 75376 GGATCTTTCATGTGAATGTTTAGAGACTGCGATTGGTCAATGAAAGCACCACGATCAGCA 75435
Query 70969 GCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATA 71028
||||||| | | || || | ||| ||||||| || || || | ||||||
Sbjct 75436 GCCATTTGCACAACTGTACGCTGGGAAATCTCCCAAACGGTCTTGTACAGAGCTTTAATA 75495
Query 71029 TCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTGCAATAATCCTATTTTTG 71085
|| | |||| | | | | ||||||||||| ||| || |||||||| | ||| ||
Sbjct 75496 TCAGCAGGAATGCTAGAGATGTTCTGAATGGAGCCATTGTCCGCAATAATGCGATTCTTC 75555
Query 71086 ATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACT 71145
|| | ||| |||||| ||| || | | ||||| || || || ||
Sbjct 75556 ATATTGTCAGACCATAAACCAAGATCGACTAGGTCACGTAGGAGCCAGGGGTTGACGACC 75615
Query 71146 TGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGAC 71205
|| || || |||| | || | || |||||| || || || ||||| | ||
Sbjct 75616 TGGAACTCGCCAGCAAGAACGCGGCGCTGGTAAATGTTGGATGTGTAGGGTTCGAAGCAC 75675
Query 71206 TCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTA 71265
||||| || |||| ||| || | || || || ||||| ||||| || | ||| |
Sbjct 75676 TCATTGTTGCCCAGAATCTGCGACGTGCTGGCTGTAGGCATGGGTGCAACTAGAAGAGAA 75735
Query 71266 TTTCTAAGACCATG-TGATCGGATTTTATCTTTTAGAGATTCCCAATTCCAAAGATC 71321
|| | | |||||| || | || || || |||||||| ||| | ||| |||||
Sbjct 75736 TTGCGTACACCATGCTGCT-TAATCTTCTCCTTTAGAGAAGTCCAGTCCCACAGATC 75791
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671130978544800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |