Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20manginecans_20[genbank_20GCA_5F000712455.1_202014-06- 26] 980 sequences; 31,706,104 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq152 93.3 4e-14 >seq152 Length=67719 Score = 93.3 bits (102), Expect = 4e-14 Identities = 121/162 (75%), Gaps = 8/162 (5%) Strand=Plus/Plus Query 5594 AGCTGCGCTATTCGGTCGCCCGTCTTT-ACCTCGAAATCG---TTGTGGCCGAAGTTGAA 5649 ||||| || || ||||||||| ||||| |||||||| ||| | ||| || ||||| Sbjct 52085 AGCTGAGCAATGCGGTCGCCC-TCTTTGACCTCGAAGTCGGCATCATGGT-GA--TTGAA 52140 Query 5650 CAGCACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCCCACGTCGAT 5709 ||| | || || | ||| ||||| ||||| || || || || || || ||||| Sbjct 52141 CAGGAGAACCTTGACTTCGCCACGGTAATCGGCATCAATGACACCAGCACCGGTATCGAT 52200 Query 5710 GAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCC 5751 ||||||||| | |||||||||||||||||||| | |||||| Sbjct 52201 GAAGTGCTTAGCAGCCAGGCCGGAGCGGGGAGCGATGCGGCC 52242 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430049263537760