Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20manginecans_20[genbank_20GCA_5F000712455.1_202014-06-
26] 980 sequences; 31,706,104 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq116 398 2e-105
>seq116
Length=83673
Score = 398 bits (440), Expect = 2e-105
Identities = 1169/1782 (66%), Gaps = 26/1782 (1%)
Strand=Plus/Minus
Query 363391 TTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTA-TCAATGGTGATATTGTTGA 363449
|| || | ||||||| | ||| || |||||| ||| | | ||||| | ||||||||
Sbjct 77087 TTTGGCTTTAAGACGCTCGAGCGTTCGTACCTA-CTCAAACTTGATGGTAAGATTGTTGA 77029
Query 363450 ACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGAT---GTTGA 363506
|| || ||||| ||| |||||||||||||| | ||||| ||| || || ||
Sbjct 77028 GCGTCCCCAGCACATGATAATGCGTGTTGCTGTGGGTAT---TTGGGGTGACAAAGTCGA 76972
Query 363507 TGCCGCGATTGAAACATATAAGCTTCTAAGT-GCTCGTGTATTCACGCACGCCACGCCAA 363565
| | | ||||||| || || ||| | | || || | ||||| ||||| | || |
Sbjct 76971 TCGTGTGCTTGAAACCTACAACCTTATGTCTAGCAAGT-TCTTCACTCACGCATCACCTA 76913
Query 363566 CAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGA 363625
| | | ||||| || |||| | | ||| ||||||| || || || | | ||||
Sbjct 76912 CGCTCTTTAATGCCGGTACTCCCCAGGCTCAGTTGTCTTCATGTTTCCTAGTCGACATGA 76853
Query 363626 AGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGA 363685
|||| || ||||||||| || | || || || |||| |||||| | ||||||||||
Sbjct 76852 AGGATGACAGCATCGAGGGCATTTACGATACCCTCAAGACTTGTGCCATGATTTCCAAGA 76793
Query 363686 ATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGC 363744
|| || || || ||| | | ||| | ||||||| || | | |||||||
Sbjct 76792 TGGCTGGTGGTATCGGTCTCAATGTTCACCGTATTCGTGCCACTGG-CTCTTACATTGCT 76734
Query 363745 GGCACAGGGGGATACT-CGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGC 363803
||||| || |||| |||| || | ||||||||||| ||||| || |||| || ||
Sbjct 76733 GGCACTAACGG-TACTTCGAACGGCATCGTTCCCATGCTACGTGTTTTCAACAACACCGC 76675
Query 363804 GAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCC 363863
| || || |||||||||||| ||||| || || ||||| || |||||||||||
Sbjct 76674 CCGTTATGTTGACCAGGGTGGAAACAAGCGACCTGGAGCCTTTGCCATTTATCTCGAGCC 76615
Query 363864 TCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATT 363923
||||| ||| | || ||||| || || | || || ||| ||||| || ||| |
Sbjct 76614 ATGGCATGCTGATGTCTTCGAGTTCCTCGACTTACGCAAGAACCACGGAAAGGAAGAAGT 76555
Query 363924 GCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGA 363983
||||| ||||| || |||| || || ||| | | ||| || |||||||| || ||
Sbjct 76554 CCGTGCTCGTGACCTATTCTTGGCCCTGTGGATCTGCGACTTGTTCATGAAGCGTGTTGA 76495
Query 363984 GGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATG 364043
| | || | ||| | ||| | ||||| | ||||| || || | | ||| |
Sbjct 76494 GAAGAATGAGGACTGGACTCTCATGTGCCCCAATGAATGCCCCGGCTTGGCGGATTGCTA 76435
Query 364044 GGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGAC 364103
|| || || | || ||||| || |||||||| || |||||| | ||| | |
Sbjct 76434 TGGCGAAGAGTTTGAGGCTCTGTATGAAAAGTACGAGAAGGAGGGTCGCGGTCGCATGGT 76375
Query 364104 AATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACC 364163
| || ||||| || |||| |||||| |||| | |||| |||||| || | ||
Sbjct 76374 TGTCAAGGCCCAGAAACTGTGGTATGCCATTCTGGAGGCTCAGACTGAGACTGGCAACCC 76315
Query 364164 CTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAAT 364223
| |||| | |||||||| |||||||||||| ||| ||| | | || ||||| ||
Sbjct 76314 TTTTATGCTCTACAAAGACCACTGCAACCGCAAGAGCAATCAGAAAAATCTAGGTACCAT 76255
Query 364224 TCAGCAGAGC-AACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCG 364282
|| |||| | ||||| || || |||||||| || ||| || || || ||| || |
Sbjct 76254 TC-GCAGTTCGAACCTGTGCACTGAGATTATCGAGTACTGTGCCCCTGATGAGGTCGCTG 76196
Query 364283 TATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT------AAAAGATGGTACTTTTG 364336
| || ||||| || || | || ||||| | || || || | ||| | ||
Sbjct 76195 TGTGCAACCTAGCATCTCTAGCCCTTCCTTCCTTCGTGGACTACAACAAGGGTGAGTATG 76136
Query 364337 ACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCG 364396
|| | | || | || || ||| | || | | |||| || || | ||||
Sbjct 76135 ACTTTAAAAAGCTACACGAAGTCACCCAAGTTGTTGTTCGCAACCTAAACCGCATCATCG 76076
Query 364397 ACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGATTG 364456
| |||| | || || | | ||||| | || ||||| || || || ||||
Sbjct 76075 ATGTGAATCACTACCCTGTCCAGGAAGCTCACAACAGCAACATGCGCCACCGTCCCATTG 76016
Query 364457 GTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCGC 364516
|| | |||||||||||||| ||||||| ||| | ||| ||| | ||||| || |
Sbjct 76015 GTGTCGGTGTACAGGGCCTGGCTGACGCTTTCCTTGCTCTCCGCATGCCTTTTGAATCCC 75956
Query 364517 CTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTG 364576
|||| || || || || ||| |||| |||||||| || || |||||| | ||||
Sbjct 75955 CTGAAGCACGCCAGCTCAACAAGCAGATTTTTGAAACCATCTACCACGCCGCACTAACTG 75896
Query 364577 CTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCTTT 364636
|||| || | || | || |||| | ||||| ||||||||||| || ||| | |
Sbjct 75895 CTTCAATGGAAATCGCCCAGACGGAGGGTACTTACTCAACTTATGAGGGTTCTCCTGTCT 75836
Query 364637 CGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTGGG 364696
| || || | || ||||||||| | ||| |||| || || || | ||| |||||
Sbjct 75835 CCCAAGGCATCTTGCAGTTTGATATGTGGGATGTGACTCCTAGTGATCTGTGGGACTGGA 75776
Query 364697 ATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGCGCCCA 364756
| | ||| || ||||| |||||||| ||||| || || | || ||||
Sbjct 75775 CTTCTCTAAAGGAGAAGATTAAGCAGCATGGTGTACGCAATTCTCTTCTAGTTGCACCCA 75716
Query 364757 TGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAA 364816
|||| || || || | ||||| || || ||||| |||||||||||||| | |||
Sbjct 75715 TGCCTACAGCCAGCACGTCGCAGATTCTGGGCAACAATGAGTGCTTCGAACCCTACACAT 75656
Query 364817 GCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAG 364876
||| |||| ||||| |||||| | || || || | ||| || || | ||
Sbjct 75655 CCAACATTTACCAGCGCCGCGTTCTTGCTGGCGAGTTCCAGGTCGTCAACCCCTGGCTCC 75596
Query 364877 TCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATCGCCG 364936
| || || ||| | || | ||| ||||| |||||||| || || || |
Sbjct 75595 TACGTGACCTAGTCGATCTTGGTTTATGGTCTGACAATATGAAGAATCGCATTATTGCGG 75536
Query 364937 CTAATGGTTCTGTGCAGAACAT-TCCAGGATTTCCAGAAGATCTGAAGCCTATTTACAAA 364995
||||| || | |||||||| || || | |||| | ||| | || || | |||||
Sbjct 75535 ACAATGGCTCCATTCAGAACATCTCTAGCA-TTCCTGCTGATATTAAAGCTCTGTACAAG 75477
Query 364996 ACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGCTTTT 365055
||||| ||||| |||||| ||| || | | | ||||| || ||||| ||||||||
Sbjct 75476 ACCGTTTGGGAGATTTCCCAGCGTACAGTTGTGCAAATGGCTGCTGATCGTGGTGCTTTC 75417
Query 365056 ATCTGTCAGAGC-CAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCAAGCTTAC 365114
|| || | | | ||||| | ||| | ||||| | || ||| | |||| | ||
Sbjct 75416 AT-TGACCAATCGCAGTCTCTAAACATTCACATGAAAGATCCTACCATGGGCAAGATCAC 75358
Query 365115 ATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156
|||||| || || |||||| ||||| ||||| ||
Sbjct 75357 CAGCATGCACTTTGCTGGCTGGAAACTAGGTCTCAAGACGGG 75316
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303337234766360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |