Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20manginecans_20[genbank_20GCA_5F000712455.1_202014-06- 26] 980 sequences; 31,706,104 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq116 398 2e-105 >seq116 Length=83673 Score = 398 bits (440), Expect = 2e-105 Identities = 1169/1782 (66%), Gaps = 26/1782 (1%) Strand=Plus/Minus Query 363391 TTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTA-TCAATGGTGATATTGTTGA 363449 || || | ||||||| | ||| || |||||| ||| | | ||||| | |||||||| Sbjct 77087 TTTGGCTTTAAGACGCTCGAGCGTTCGTACCTA-CTCAAACTTGATGGTAAGATTGTTGA 77029 Query 363450 ACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGAT---GTTGA 363506 || || ||||| ||| |||||||||||||| | ||||| ||| || || || Sbjct 77028 GCGTCCCCAGCACATGATAATGCGTGTTGCTGTGGGTAT---TTGGGGTGACAAAGTCGA 76972 Query 363507 TGCCGCGATTGAAACATATAAGCTTCTAAGT-GCTCGTGTATTCACGCACGCCACGCCAA 363565 | | | ||||||| || || ||| | | || || | ||||| ||||| | || | Sbjct 76971 TCGTGTGCTTGAAACCTACAACCTTATGTCTAGCAAGT-TCTTCACTCACGCATCACCTA 76913 Query 363566 CAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGA 363625 | | | ||||| || |||| | | ||| ||||||| || || || | | |||| Sbjct 76912 CGCTCTTTAATGCCGGTACTCCCCAGGCTCAGTTGTCTTCATGTTTCCTAGTCGACATGA 76853 Query 363626 AGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGA 363685 |||| || ||||||||| || | || || || |||| |||||| | |||||||||| Sbjct 76852 AGGATGACAGCATCGAGGGCATTTACGATACCCTCAAGACTTGTGCCATGATTTCCAAGA 76793 Query 363686 ATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGC 363744 || || || || ||| | | ||| | ||||||| || | | ||||||| Sbjct 76792 TGGCTGGTGGTATCGGTCTCAATGTTCACCGTATTCGTGCCACTGG-CTCTTACATTGCT 76734 Query 363745 GGCACAGGGGGATACT-CGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGC 363803 ||||| || |||| |||| || | ||||||||||| ||||| || |||| || || Sbjct 76733 GGCACTAACGG-TACTTCGAACGGCATCGTTCCCATGCTACGTGTTTTCAACAACACCGC 76675 Query 363804 GAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCC 363863 | || || |||||||||||| ||||| || || ||||| || ||||||||||| Sbjct 76674 CCGTTATGTTGACCAGGGTGGAAACAAGCGACCTGGAGCCTTTGCCATTTATCTCGAGCC 76615 Query 363864 TCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATT 363923 ||||| ||| | || ||||| || || | || || ||| ||||| || ||| | Sbjct 76614 ATGGCATGCTGATGTCTTCGAGTTCCTCGACTTACGCAAGAACCACGGAAAGGAAGAAGT 76555 Query 363924 GCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGA 363983 ||||| ||||| || |||| || || ||| | | ||| || |||||||| || || Sbjct 76554 CCGTGCTCGTGACCTATTCTTGGCCCTGTGGATCTGCGACTTGTTCATGAAGCGTGTTGA 76495 Query 363984 GGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATG 364043 | | || | ||| | ||| | ||||| | ||||| || || | | ||| | Sbjct 76494 GAAGAATGAGGACTGGACTCTCATGTGCCCCAATGAATGCCCCGGCTTGGCGGATTGCTA 76435 Query 364044 GGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGAC 364103 || || || | || ||||| || |||||||| || |||||| | ||| | | Sbjct 76434 TGGCGAAGAGTTTGAGGCTCTGTATGAAAAGTACGAGAAGGAGGGTCGCGGTCGCATGGT 76375 Query 364104 AATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACC 364163 | || ||||| || |||| |||||| |||| | |||| |||||| || | || Sbjct 76374 TGTCAAGGCCCAGAAACTGTGGTATGCCATTCTGGAGGCTCAGACTGAGACTGGCAACCC 76315 Query 364164 CTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAAT 364223 | |||| | |||||||| |||||||||||| ||| ||| | | || ||||| || Sbjct 76314 TTTTATGCTCTACAAAGACCACTGCAACCGCAAGAGCAATCAGAAAAATCTAGGTACCAT 76255 Query 364224 TCAGCAGAGC-AACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCG 364282 || |||| | ||||| || || |||||||| || ||| || || || ||| || | Sbjct 76254 TC-GCAGTTCGAACCTGTGCACTGAGATTATCGAGTACTGTGCCCCTGATGAGGTCGCTG 76196 Query 364283 TATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT------AAAAGATGGTACTTTTG 364336 | || ||||| || || | || ||||| | || || || | ||| | || Sbjct 76195 TGTGCAACCTAGCATCTCTAGCCCTTCCTTCCTTCGTGGACTACAACAAGGGTGAGTATG 76136 Query 364337 ACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCG 364396 || | | || | || || ||| | || | | |||| || || | |||| Sbjct 76135 ACTTTAAAAAGCTACACGAAGTCACCCAAGTTGTTGTTCGCAACCTAAACCGCATCATCG 76076 Query 364397 ACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGATTG 364456 | |||| | || || | | ||||| | || ||||| || || || |||| Sbjct 76075 ATGTGAATCACTACCCTGTCCAGGAAGCTCACAACAGCAACATGCGCCACCGTCCCATTG 76016 Query 364457 GTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCGC 364516 || | |||||||||||||| ||||||| ||| | ||| ||| | ||||| || | Sbjct 76015 GTGTCGGTGTACAGGGCCTGGCTGACGCTTTCCTTGCTCTCCGCATGCCTTTTGAATCCC 75956 Query 364517 CTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTG 364576 |||| || || || || ||| |||| |||||||| || || |||||| | |||| Sbjct 75955 CTGAAGCACGCCAGCTCAACAAGCAGATTTTTGAAACCATCTACCACGCCGCACTAACTG 75896 Query 364577 CTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCTTT 364636 |||| || | || | || |||| | ||||| ||||||||||| || ||| | | Sbjct 75895 CTTCAATGGAAATCGCCCAGACGGAGGGTACTTACTCAACTTATGAGGGTTCTCCTGTCT 75836 Query 364637 CGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTGGG 364696 | || || | || ||||||||| | ||| |||| || || || | ||| ||||| Sbjct 75835 CCCAAGGCATCTTGCAGTTTGATATGTGGGATGTGACTCCTAGTGATCTGTGGGACTGGA 75776 Query 364697 ATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGCGCCCA 364756 | | ||| || ||||| |||||||| ||||| || || | || |||| Sbjct 75775 CTTCTCTAAAGGAGAAGATTAAGCAGCATGGTGTACGCAATTCTCTTCTAGTTGCACCCA 75716 Query 364757 TGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTACAA 364816 |||| || || || | ||||| || || ||||| |||||||||||||| | ||| Sbjct 75715 TGCCTACAGCCAGCACGTCGCAGATTCTGGGCAACAATGAGTGCTTCGAACCCTACACAT 75656 Query 364817 GCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACCTAG 364876 ||| |||| ||||| |||||| | || || || | ||| || || | || Sbjct 75655 CCAACATTTACCAGCGCCGCGTTCTTGCTGGCGAGTTCCAGGTCGTCAACCCCTGGCTCC 75596 Query 364877 TCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATCGCCG 364936 | || || ||| | || | ||| ||||| |||||||| || || || | Sbjct 75595 TACGTGACCTAGTCGATCTTGGTTTATGGTCTGACAATATGAAGAATCGCATTATTGCGG 75536 Query 364937 CTAATGGTTCTGTGCAGAACAT-TCCAGGATTTCCAGAAGATCTGAAGCCTATTTACAAA 364995 ||||| || | |||||||| || || | |||| | ||| | || || | ||||| Sbjct 75535 ACAATGGCTCCATTCAGAACATCTCTAGCA-TTCCTGCTGATATTAAAGCTCTGTACAAG 75477 Query 364996 ACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGCTTTT 365055 ||||| ||||| |||||| ||| || | | | ||||| || ||||| |||||||| Sbjct 75476 ACCGTTTGGGAGATTTCCCAGCGTACAGTTGTGCAAATGGCTGCTGATCGTGGTGCTTTC 75417 Query 365056 ATCTGTCAGAGC-CAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCAAGCTTAC 365114 || || | | | ||||| | ||| | ||||| | || ||| | |||| | || Sbjct 75416 AT-TGACCAATCGCAGTCTCTAAACATTCACATGAAAGATCCTACCATGGGCAAGATCAC 75358 Query 365115 ATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 |||||| || || |||||| ||||| ||||| || Sbjct 75357 CAGCATGCACTTTGCTGGCTGGAAACTAGGTCTCAAGACGGG 75316 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303337234766360