Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20manginecans_20[genbank_20GCA_5F000712455.1_202014-06- 26] 980 sequences; 31,706,104 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq28 136 4e-27 seq116 125 7e-24 seq105 125 7e-24 seq61 116 3e-21 seq100 113 4e-20 >seq28 Length=151797 Score = 136 bits (150), Expect = 4e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| |||| |||||| || || || | || |||||||| || |||||||| ||| Sbjct 109005 GCCACCACGCAGACGCAGAACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGA 108946 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | |||||| ||||| |||||||| || ||| |||| | |||||||||||| ||||| Sbjct 108945 GAGGGTGCGGCCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCGGGAGG 108886 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || || || ||| || ||||| | || | ||||| | |||||||| Sbjct 108885 GATACCCTCCTTATCCTGGATCTTGGACTTGACATTGTCAATGGTATCAGAGGACTCGAC 108826 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||||| ||| || || || | || || ||||| || ||||| Sbjct 108825 TTCGAGGGTAATGGTCTTGCCCGTCAAGGTCTTGACGAAGATTTGCAT 108778 Score = 132 bits (146), Expect = 5e-26 Identities = 151/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| || ||||||| ||| | || |||||||| ||||||||||| ||| | Sbjct 108264 CCACCACGCAGGCGGAGCACTAGATGGAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAC 108205 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| |||||||| || ||| |||| | ||||||||||||||||||| Sbjct 108204 AGGGTGCGGCCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGG 108145 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||| | | || | |||||| | |||||| | Sbjct 108144 ATACCCTCCTTGTCCTGGATCTTAGACTTAACGTTGTCAATAGTATCCGAGGACTCCACC 108085 Query 131188 TCGACGGTAACGGTTTTACCGGT 131210 |||| ||| | ||| || || || Sbjct 108084 TCGAGGGTGATGGTCTTGCCAGT 108062 Score = 127 bits (140), Expect = 2e-24 Identities = 157/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| |||||| || || || | || || || || ||||||||||| ||| Sbjct 108548 CCACCACGCAGACGCAGGACCAAGTGAAGAGTAGATTCTTTCTGAATGTTGTAGTCGGAA 108489 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||||| |||||||| || ||| |||| | |||||||||||||||||| Sbjct 108488 AGGGTACGGCCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGA 108429 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | || |||| |||||||| Sbjct 108428 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAGGACTCGACT 108369 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTAC 131222 |||| ||||| ||| || ||||| || || || || Sbjct 108368 TCGAGGGTAATGGTCTTTCCGGTAAGGGTCTTGAC 108334 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| |||||| || || || | || || || || ||||||||||| || | Sbjct 108776 CCACCACGCAGACGCAGAACCAAGTGAAGAGTAGATTCTTTCTGAATGTTGTAGTCCGAC 108717 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || ||||| |||||||| || || | || | ||||||||| ||||| ||| Sbjct 108716 AGGGTACGGCCATCCTCGAGCTGCTTTCCAGCAAAAATGAGACGCTGCTGATCCGGGGGG 108657 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || || || ||| || ||||| | || | ||||| | |||||||| Sbjct 108656 ATACCCTCCTTATCCTGGATCTTGGACTTGACATTGTCAATGGTATCAGAGGACTCGACT 108597 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||||| ||| || || || | || || ||||| || ||||| Sbjct 108596 TCGAGGGTAATGGTCTTGCCCGTCAAGGTCTTGACGAAGATTTGCAT 108550 >seq116 Length=83673 Score = 125 bits (138), Expect = 7e-24 Identities = 699/1111 (63%), Gaps = 11/1111 (1%) Strand=Plus/Plus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 ||||||||||| |||||||| || | || || ||| || | ||| || ||| ||||| Sbjct 75607 TTGACGACCTGGAACTCGCCAGCAAGAACGCGGCGCTGGTAAATGTTGGATGTGTAGGGT 75666 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 || || |||| || |||||||| || || | || | || || |||||| || || Sbjct 75667 TCGAAGCACTCATTGTTGCCCAGAATCTGCGACGTGCTGGCTGTAGGCATGGGTGCAACT 75726 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 | | |||||||| | || |||| ||| || | |||||||| | | ||| ||||| Sbjct 75727 AGAAGAGAATTGCGTACACCATGCTGCTTAATCTTCTCCTTTAGAGAAGTCCAGTCCCAC 75786 Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGCTG 145297 || | | || |||| |||||||| || ||||||| ||||| | | | | || Sbjct 75787 AGATCACTAGGAGTCACATCCCACATATCAAACTGCAAGATGCCTTGGGAGACAGGAGAA 75846 Query 145298 CCTTGAAAGGAACTGTAACTGCCCCAAGTTTTGGCGAGCTCGCAACTCGCCTCCAGAGCG 145357 || | | | | |||| | ||| || | ||||| || || || ||| Sbjct 75847 CCCTCATAAGTTGAGTAAGTACCCTCCGTCTGGGCGATTTCCATTGAAGCAGTTAGTGCG 75906 Query 145358 CCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCGTAC 145417 || || || || || ||| ||| |||||||| | |||||| | || | Sbjct 75907 GCGTGGTAGATGGTTTCAAAAATCTGCTTGTTGAGCTGGCGTGCTTCAGGGGATTCAAAA 75966 Query 145418 GGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGCCGA 145477 |||||||| || | ||||| || || || ||||||| || || || ||||| || Sbjct 75967 GGCATGCGGAGAGCAAGGAAAGCGTCAGCCAGGCCCTGTACACCGACACCAATGGGACGG 76026 Query 145478 TGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATCGATTACGGTCGATAATTTTA 145537 || ||||||||| | || || || ||| || |||| ||||| || Sbjct 76027 TGGCGCATGTTGCTGTTGTGAGCTTCCTGGACAGGGTAGTGATTCACATCGATGATGCGG 76086 Query 145538 TTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTCAAACCGAGCC 145597 || | ||| || || || || | || | | | | ||||| ||||||| || | || Sbjct 76087 TTTAGGTTGCGAACAACAACTTGGGTGACTTCGTGTAGCTTTTTAAAGTCATACTCACCC 76146 Query 145598 TCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAACTGCCGTCTCC 145657 | || | |||| || | | ||| | || || | || || || || ||| Sbjct 76147 TTGTTGTAGTCCACGAAGGAAGGAAGGGCTAGAGATGCTAGGTTGCACACAGCGACCTCA 76206 Query 145658 TCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGTTCCCAGA 145717 || | | | | ||| | | ||||| | ||||| || || ||||| || ||| Sbjct 76207 TCAGGGGCACAGTACTCGATAATCTCAGTGCACAGGTTCGAACTGCGAATGGTACCTAGA 76266 Query 145718 TTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCCGCCAGTC 145777 |||| |||||| || || | |||||| ||| ||||||||||| | || ||||||| Sbjct 76267 TTTTTCTGATTGCTCTTGCGGTTGCAGTGGTCTTTGTAGAGCATAAAAGGGTTGCCAGTC 76326 Query 145778 TCCACCTGCGTCTCCACGATAAAACGGTGCAAGTCCTGCGCACGCACCTGC-TGCTGGTA 145836 || ||| | ||||| || | || | ||| || || | ||| | Sbjct 76327 TCAGTCTGAGCCTCCAGAATGGCATACCACAGTTTCTGGGCCTTGACAACCATGC-GACC 76385 Query 145837 GCGGCCCTCTTCTTCGTA--TTTCCTGTAGAGCTCCTCAAACGCGGAACCGTAGCAATCG 145894 ||| ||||| | ||||| |||| | |||| |||||||| | || |||||||| Sbjct 76386 GCGACCCTCCTTCTCGTACTTTTCATACAGAG--CCTCAAACTCTTCGCCATAGCAATCC 76443 Query 145895 GACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGCGTTGACGCGC 145954 | || |||||| || | ||||| ||||| || | ||| | | || | || ||| Sbjct 76444 GCCAAGCCGGGGCATTCATTGGGGCACATGAGAGTCCAGTCCTCATTCTTCTCAACACGC 76503 Query 145955 TCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGCTTTGCAATCCTCA 146014 | ||| ||||| || | |||||| || | | | ||| || || | || || Sbjct 76504 TTCATGAACAAGTCGCAGATCCACAGGGCCAAGAATAGGTCACGAGCACGGACTTCTTCC 76563 Query 146015 GCACCCATGTT-TCGCTTCAAATTAAGCACACTATAGATGTCCGCGTGCCACGGTTCAAT 146073 || ||| | || | | | | || | | ||| || || ||||| || || | Sbjct 76564 TTTCCGTGGTTCTTGCGTAAGTCGAGGAACTCGA-AGACATCAGCATGCCATGGCTCGAG 76622 Query 146074 ATAGACGGCGAGGGCTCCTTTTCGTTTG---CCACCCTGGTCCACGTGACGTACCATGTT 146130 ||| | ||| | |||||| ||| ||| ||||||||||| || | ||| | |||| Sbjct 76623 ATAAATGGCAAAGGCTCCAGGTCGCTTGTTTCCACCCTGGTCAACATAACGGGCGGTGTT 76682 Query 146131 GTTAAAGACGCGCACCATGGGCTCGACGCCG 146161 ||| || || || | |||||| ||| |||| Sbjct 76683 GTTGAAAACACGTAGCATGGGAACGATGCCG 76713 >seq105 Length=86313 Score = 125 bits (138), Expect = 7e-24 Identities = 355/539 (66%), Gaps = 15/539 (3%) Strand=Plus/Plus Query 46063 CTGCTTAATGCGTTTGAACGTATGCCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAG 46122 ||| | ||||| |||| ||| || ||| | ||| || |||||||||| ||||| Sbjct 44365 CTGTTCAATGCCATTGACACTATTCCCTGCATCCGCCGCAAGGCCGACTGGGCTCTGAAG 44424 Query 46123 TGGATCAACAGCAGCACCGCGACTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAG 46182 ||||||| | || |||| || ||| |||| | || |||||||| ||| ||| Sbjct 44425 TGGATCACCGACAAGGAGTCGACGTTTGCCCAGCGCCTAGTTGCCTTTGCTGCTGTCGAG 44484 Query 46183 GGCGTCtttttttCTGGCAGTTTTGCCGCCATCTT-TTACATCAAAACCAAGGGCATCAT 46241 ||| ||||||| || ||| || ||| ||||||| | | | || | || | |||| Sbjct 44485 GGCATCTTTTTCTCAGGCGCCTTCGCCTCCATCTTCTGGCTCCGCAAGCGTGGTC-TCAT 44543 Query 46242 GCCCGGCCTGACGTTTAGCAACGAGCTGATATCGCGCGACGAGGGCCTGCATACGGACTT 46301 ||| || ||||| || |||||||| || || || || ||||||||||| || ||||| Sbjct 44544 GCCTGGTCTGACCTTCTCAAACGAGCTTATTTCTCGTGATGAGGGCCTGCACACCGACTT 44603 Query 46302 TGCGTGTCTCTACTATAACACTCGCGTGCACGACAAGCTTGCGCC-----CGACACCGTG 46356 ||| || || || | ||||| | | |||| | || || ||| ||| Sbjct 44604 TGCTTG--CCTGCTGT---TCTCGCAT-CTGAACAACC--GCCCCAGCAAGGACCTTGTG 44655 Query 46357 CTGAGCATGTTCAAGGAGGCGGTGGCCATTGAGAAGGAGTTTTTTACGGCCGCACTGCCC 46416 | | || ||| || || || | || ||||||||||| | || | || |||||| Sbjct 44656 CAAAAGATCATCACTGATGCCGTCGTGATCGAGAAGGAGTTCCTGACCGAGGCTCTGCCC 44715 Query 46417 GCTGCCCTGCTGGGCATGAACGCACAGTCAATGTGCGACTACATCGAGTTTGTAGCGGAC 46476 | ||||| || |||||||| | ||| | ||||| |||||||| || ||| Sbjct 44716 TGCGGTCTGCTAGGAATGAACGCTGATCTGATGAAGCAGTACATTGAGTTTGTTGCTGAC 44775 Query 46477 CGACTGCTCGTGCAGCTTCACCAGCCGAAGCATTTTCACGCGCGCAATCCATTTGAGTTT 46536 || ||||| || || | | |||| | | || || || || || || Sbjct 44776 CGCCTGCTTGTTGCTCTAGGCAACGAGAAGGTGTACCGTGCCACAAACCCCTTCGACTTC 44835 Query 46537 ATGAACAACATCTCCCTGGAGGGCAAAACTAATTTTTTCGAAAAGCGCGTCGGCGAGTA 46595 ||| | |||||||| || | ||||| ||||| || || || ||||| |||||||| || Sbjct 44836 ATGGAGAACATCTCGCTCGGCGGCAAGACTAACTTCTTTGAGAAGCGTGTCGGCGACTA 44894 >seq61 Length=115161 Score = 116 bits (128), Expect = 3e-21 Identities = 157/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||||| || | || | ||| |||||||| || |||||||| ||| | Sbjct 22263 CCACCACGCAGGCGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 22322 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| |||||||| || || |||| || |||||||||||||| || Sbjct 22323 AGAGTGCGGCCATCCTCAAGCTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCCGGGGGA 22382 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || ||||| | || | || || | ||||||| Sbjct 22383 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATCGTGTCCGAAGACTCGACC 22442 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAA 131226 || | ||||| ||| ||||| || || || || |||||| Sbjct 22443 TCCAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAAA 22481 >seq100 Length=89839 Score = 113 bits (124), Expect = 4e-20 Identities = 139/190 (73%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 |||| ||||||||||| || || ||| || ||||| ||||||||||| ||| ||| Sbjct 17211 CCTTCTGAATGTTGTAGTCAGACAGGGTACGGCCATCCTCCAGCTGCTTGCCAGCGAAGA 17152 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | | |||||||||||||| || || || || ||||| || || ||||| | | Sbjct 17151 TCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTGT 17092 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | ||| || | |||||| | |||| ||||| || ||||| || || || || |||| Sbjct 17091 CGATAGTGTCCGAGGACTCAACCTCGAGGGTAATCGTCTTACCCGTAAGGGTCTTGACGA 17032 Query 131225 AAATCTGCAT 131234 |||||||||| Sbjct 17031 AAATCTGCAT 17022 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472007017843200