Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20manginecans_20[genbank_20GCA_5F000712455.1_202014-06-
26] 980 sequences; 31,706,104 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq28 93.3 3e-14
>seq28
Length=151797
Score = 93.3 bits (102), Expect = 3e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
||||||| | || ||||| ||||| |||||||| || || ||||| ||||| || |
Sbjct 108778 TACCACCACGCAGACGCAGAACCAAGTGAAGAGTAGATTCTTTCTGAATGTTGTAGTCCG 108719
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
||| ||| | || || | || ||||| ||||| || || || || ||||| | ||
Sbjct 108718 ACAGGGTACGGCCATCCTCGAGCTGCTTTCCAGCAAAAATGAGACGCTGCTGATCCGGGG 108659
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
||| || || || ||| || || ||| ||||| | | ||||| || |
Sbjct 108658 GGATACCCTCCTTATCCTGGATCTTGGACTTGACATTGTCAATGGTATCAGAGGACTCGA 108599
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|||| | ||||| || || ||||||||||| || ||||| || |||||
Sbjct 108598 CTTCGAGGGTAATGGTCTTGCCCGTCAAGGTCTTGACGAAGATTTGCAT 108550
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334943199474380
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |