Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20manginecans_20[genbank_20GCA_5F000712455.1_202014-06- 26] 980 sequences; 31,706,104 total letters Query= NC_008187.1 Length=191100 Score E Sequences producing significant alignments: (Bits) Value seq317 82.4 9e-11 >seq317 Length=32422 Score = 82.4 bits (90), Expect = 9e-11 Identities = 106/144 (74%), Gaps = 2/144 (1%) Strand=Plus/Minus Query 15056 ATTGGCGACAAGTTTTGCTCTGGTATGGCGCAAAAGGGCACGTGCGGCATGATTTTCCCC 15115 ||||||||||||||| ||| || | |||||||| || || ||| | || | Sbjct 12119 ATTGGCGACAAGTTTGCGTCTCGTCACGGTCAAAAGGGTACAATTGGTGTGACATACCGC 12060 Query 15116 CAGGAAGACATGCCCTTTA-CCGCGTCAGGCATGACGCCCGACATTATCATCAACCCCAA 15174 || ||||| ||||| |||| ||||| ||||| ||||| || || ||||| |||||| | Sbjct 12059 CAAGAAGATATGCCATTTACCCGCG-AGGGCATCACGCCTGATATCATCATTAACCCCCA 12001 Query 15175 CTGCATCCCGTCCCGCATGACCAT 15198 | |||||| || || |||||||| Sbjct 12000 CGCCATCCCTTCGCGTATGACCAT 11977 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611384510448000