Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20manginecans_20[genbank_20GCA_5F000712455.1_202014-06-
26] 980 sequences; 31,706,104 total letters
Query= NC_008187.1
Length=191100
Score E
Sequences producing significant alignments: (Bits) Value
seq317 82.4 9e-11
>seq317
Length=32422
Score = 82.4 bits (90), Expect = 9e-11
Identities = 106/144 (74%), Gaps = 2/144 (1%)
Strand=Plus/Minus
Query 15056 ATTGGCGACAAGTTTTGCTCTGGTATGGCGCAAAAGGGCACGTGCGGCATGATTTTCCCC 15115
||||||||||||||| ||| || | |||||||| || || ||| | || |
Sbjct 12119 ATTGGCGACAAGTTTGCGTCTCGTCACGGTCAAAAGGGTACAATTGGTGTGACATACCGC 12060
Query 15116 CAGGAAGACATGCCCTTTA-CCGCGTCAGGCATGACGCCCGACATTATCATCAACCCCAA 15174
|| ||||| ||||| |||| ||||| ||||| ||||| || || ||||| |||||| |
Sbjct 12059 CAAGAAGATATGCCATTTACCCGCG-AGGGCATCACGCCTGATATCATCATTAACCCCCA 12001
Query 15175 CTGCATCCCGTCCCGCATGACCAT 15198
| |||||| || || ||||||||
Sbjct 12000 CGCCATCCCTTCGCGTATGACCAT 11977
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 611384510448000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |