Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20manginecans_20[genbank_20GCA_5F000712455.1_202014-06-
26] 980 sequences; 31,706,104 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq105 179 4e-40
>seq105
Length=86313
Score = 179 bits (198), Expect = 4e-40
Identities = 480/726 (66%), Gaps = 11/726 (2%)
Strand=Plus/Minus
Query 92927 TCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGAAGACGTACA 92986
||||| ||||| || |||||||| ||||| |||| ||||||||||| ||||
Sbjct 44774 TCAGCAACAAACTCAATGTACTGCTTCATCAGATCAGCGTTCATTCCTAGCAGACCGCAG 44715
Query 92987 GGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAGATTTCTATT 93046
|| ||||| ||||||| ||| || |||||||| || ||||| || | | ||| || ||
Sbjct 44714 GGCAGAGCCTCGGTCAGGAACTCCTTCTCGATCACGACGGCATCAGTGATGAT--CTTTT 44657
Query 93047 ACTCTAC-TATTTGGTGGTTT--TTGTACGACATAATTGTACATTAAGCACGCAAAGTCG 93103
| | | | ||| ||| |||| | | || | ||| | ||| |||||||||
Sbjct 44656 GCACAAGGTCCTTGCTGGGGCGGTTGTTC-AGATGCGAGAACAGCAGGCAAGCAAAGTCG 44598
Query 93104 GTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAACAGT 93163
|| || | || || || || || || | ||| || ||| || | ||| || | ||
Sbjct 44597 GTGTGCAGGCCCTCATCACGAGAAATAAGCTCGTTTGAGAAGGTCAGACCAGGCATGAGA 44538
Query 93164 CCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCACG 93223
|| || || |||||| || || || || || || || ||||| || || || ||
Sbjct 44537 CCACGCTTGCGGAGCCAGAAGATGGAGGCGAAGGCGCCTGAGAAAAAGATGCCCTCGACA 44478
Query 93224 GCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTGATCCATTTTAAA 93283
|| ||||| || || | || | |||||| | | || | ||||||| || | |
Sbjct 44477 GCAGCAAAGGCAACTAGGCGCTGGGCAAACGTCGACTCCTTGTCGGTGATCCACTTCAGA 44418
Query 93284 GCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTAAATAGGTAATCT 93343
||||| ||||| || || || || | || || || || || || |||||
Sbjct 44417 GCCCAGTCGGCCTTGCGGCGGATGCAGGGAATAGTGTCAATGGCATTGAACAGGTATGTG 44358
Query 93344 CGCT-CGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGAC 93402
|||| || | || | ||||| || || || | ||| || || ||||||| ||||
Sbjct 44357 CGCTGCGAGGGCTCCTTG-ATGTAGGTGTCAATCAGCAGCGAGTAGGTTTCAGAGTGGAT 44299
Query 93403 ATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTG 93462
|| ||||| || ||||| |||||||| || | || || | ||||||||| ||
Sbjct 44298 GTTTTCCATCATGATCTGGAAACCGTAGAAGCAGCGGGCCTCGGGGATCTGCACCTCGCC 44239
Query 93463 AGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAA 93522
|| || | ||| ||||||||||| ||||| || ||||| || || ||||| || || |
Sbjct 44238 TGAGAAGCGCTCAACGAGATTTTCGTTGACGATGCCATCAGAGGCAGCAAAGAAGGCAAG 44179
Query 93523 TATATGCTTTATAAAATGTTTCTCATCATCTTT---AAGCTTATCCCAATCGGATAGATC 93579
|| || || || | | ||| || | || | | || | ||| ||| |||||
Sbjct 44178 AATGTGGGAGATGAAGTACTGCTCGTCTTTGTTCAGACGGTTGTTCCAGTCGTGGAGATC 44119
Query 93580 TTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATC 93639
|| || ||||| | || || ||||||| || || || || || || |||||||| |
Sbjct 44118 CTTAGACAGATCAATCTCCTCAGCAGTCCAGAAGGAGGCCTCGGCCTTCTTGTACATCTG 44059
Query 93640 CCATAT 93645
||| ||
Sbjct 44058 CCAGAT 44053
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556853978455200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |