Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20manginecans_20[genbank_20GCA_5F000712455.1_202014-06- 26] 980 sequences; 31,706,104 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq28 159 6e-34 seq61 154 3e-32 seq106 150 3e-31 seq105 134 3e-26 seq100 132 9e-26 >seq28 Length=151797 Score = 159 bits (176), Expect = 6e-34 Identities = 177/236 (75%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 68226 TTTTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTA 68285 ||||| | || || || || |||| |||||||| || || ||||| || |||||||| Sbjct 109013 TTTTACTGGCCACCACGCAGACGCAGAACCAAGTGAAGAGTAGACTCCTTCTGGATGTTG 108954 Query 68286 TAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGG 68345 || |||||||| || | ||||| || | |||||| || ||||| ||||| | || ||| Sbjct 108953 TAGTCGGAGAGGGTGCGGCCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGG 108894 Query 68346 TCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT 68405 ||||| || || || ||||| || || ||||| | |||||| || ||||| || | Sbjct 108893 TCGGGAGGGATACCCTCCTTATCCTGGATCTTGGACTTGACATTGTCAATGGTATCAGAG 108834 Query 68406 GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || ||||| | ||| ||||| || ||||| | |||||||||||| || ||||| Sbjct 108833 GACTCGACTTCGAGGGTAATGGTCTTGCCCGTCAAGGTCTTGACGAAGATTTGCAT 108778 Score = 158 bits (174), Expect = 2e-33 Identities = 164/215 (76%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || |||| |||||||| || || || ||||| || ||||| || ||||| Sbjct 108548 CCACCACGCAGACGCAGGACCAAGTGAAGAGTAGATTCTTTCTGAATGTTGTAGTCGGAA 108489 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || ||||| ||||| | || ||||| || ||| Sbjct 108488 AGGGTACGGCCATCCTCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGA 108429 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || ||||| | ||||||| || |||||||| | || || ||| Sbjct 108428 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAGGACTCGACT 108369 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGAC 68449 || | ||| ||||| ||||| || ||||||||||| Sbjct 108368 TCGAGGGTAATGGTCTTTCCGGTAAGGGTCTTGAC 108334 Score = 131 bits (144), Expect = 3e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || |||| |||||||| || || || ||||| || ||||| || || || Sbjct 108776 CCACCACGCAGACGCAGAACCAAGTGAAGAGTAGATTCTTTCTGAATGTTGTAGTCCGAC 108717 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || || || ||||| | || || || || || Sbjct 108716 AGGGTACGGCCATCCTCGAGCTGCTTTCCAGCAAAAATGAGACGCTGCTGATCCGGGGGG 108657 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||| || || ||||| | |||||| || ||||| || | || || ||| Sbjct 108656 ATACCCTCCTTATCCTGGATCTTGGACTTGACATTGTCAATGGTATCAGAGGACTCGACT 108597 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||| ||||| || ||||| | |||||||||||| || ||||| Sbjct 108596 TCGAGGGTAATGGTCTTGCCCGTCAAGGTCTTGACGAAGATTTGCAT 108550 >seq61 Length=115161 Score = 154 bits (170), Expect = 3e-32 Identities = 165/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||||| || | ||| || |||||||| || |||||||| || ||||| Sbjct 22263 CCACCACGCAGGCGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 22322 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | |||||| || || || || | | || ||||| || ||| Sbjct 22323 AGAGTGCGGCCATCCTCAAGCTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCCGGGGGA 22382 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| |||||||| || ||||| | ||||||| ||||| ||||| | || || || Sbjct 22383 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATCGTGTCCGAAGACTCGACC 22442 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 |||| ||| ||||| || ||||| |||||||||||||| Sbjct 22443 TCCAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 22480 >seq106 Length=86074 Score = 150 bits (166), Expect = 3e-31 Identities = 671/1045 (64%), Gaps = 56/1045 (5%) Strand=Plus/Plus Query 224981 CGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAAGCA 225040 ||||| |||||||||| | || ||| |||||| ||||| ||||| ||| ||||| Sbjct 52758 CGCCATTGGATGTACTCGGAAGGAGTCTTGTCCAAGTGGTGGTCAATGTGGGCAAAAGCG 52817 Query 225041 TGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACACAGAGCCCCGAGTCGGT 225100 ||||| | ||| || || || ||||| |||| | | || ||| || Sbjct 52818 TGCTGCTTGATGTAGGCGATACGGATGTTCTCGTGCTGGTAGATCTCACCAACAGTGGGA 52877 Query 225101 TGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGGCCAATC 225160 ||| || || ||||| ||||| || || | ||| || ||||||||||| || || Sbjct 52878 ACAAGCTCACCAGTCAGGACATTGATCAGAGTCGACTTACCGGCACCATTGGGACCGATG 52937 Query 225161 ACGCCAATCCGGGATGACATTGCAACCTGCGAGTTCACGTTGCTGAAGATCTCAGGGCCA 225220 ||| |||| ||||| |||| | ||| | | | || | ||| |||| |||| Sbjct 52938 ACGGCAATACGGGACGACAGAGAGCACTGGAAAGTGATGTCG--GAA-ATCTG-GGGC-- 52991 Query 225221 GTTTGGTAAGCAAAGGCCACGCCACG--CAGCTTCATG---------ATGGCACGGTCCT 225269 |||||| ||| || | | || ||| || ||||| | ||| Sbjct 52992 --TTGGTAGTACCAGGGTACTGGAAGGTCATCTTGGTGGCACGAAGAATGGCCTTGGCCT 53049 Query 225270 TGGAAGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTGGTCACCGCGTCCT 225329 ||| | | |||||| ||||| |||||||||||||| ||| | || | | | | Sbjct 53050 TGGTCTTCACACCCTCAAGGAAACCGGGCTCGGGGAAGGTGAACTCGATCTCGGAGGCAC 53109 Query 225330 TCAGGTCGTAGTAAGATGCAGCCTCGGGTCGCTTTGCCACGAAAGCAGACAGGTTTCCGA 225389 || |||||||| || ||| ||| | ||| || || | | |||||| || Sbjct 53110 CAAGTTCGTAGTATGACTTGGCCGAGGGGCACTTCTTGACAAACTCGGCCAGGTTACCAC 53169 Query 225390 GGTGCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAAT-TGCCGAGCACACTGCGTCA 225448 ||| | | ||||||| | || |||| || ||||| ||| | ||| || |||| Sbjct 53170 GGTAACGCTTAAGCTTGAAGCGCT---CGTAGTGGACAATGTGCTG-GCAGACGTTGTCA 53225 Query 225449 AGGAAGCCAGAGTCGTGGGACACAATGATGGACGA-CACGTTCGTCAG--GCCCTTGAGG 225505 ||||||||||||||||| || || || ||||| | || | | || || | ||| Sbjct 53226 AGGAAGCCAGAGTCGTGAGAGACGATAATGGAAGTGCAAG---GAGAGTTGCAC---AGG 53279 Query 225506 TGCGTGATG-AGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAG 225564 | || | ||||| ||||| | || |||| ||||| ||||| ||||| ||||| Sbjct 53280 TA-GTCCTCCAGCCACTTGACGTTCTTCACATCCAGATGGTTGGTAGGCTCGTCAAGAAG 53338 Query 225565 CAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCC 225624 |||||| |||| | | || | ||| || |||| ||||||||| ||||| || || Sbjct 53339 CAGGATATCAGGAGCCTCGAAAACGGCACGGCACAGAGCCAGCTTCATCTTCCAACCACC 53398 Query 225625 GGACAGGGAGCCGATTGAAACAG-AGTGCTTAGCTTCGTCAAAGCCGTACTCCAGGAGCG 225683 || || | | ||| | ||| | | || ||| || || |||| |||| ||| Sbjct 53399 AGAAAGAGCGGAGATCTCACCAGTAATCATTTGCTCGGTGAA-GCCGAACTCGGTCAGCT 53457 Query 225684 TCTGGATAATGCGCTCGGGAGAGCTGCGAGCGGCAACGTTGGGGTCGGACGAGAGGTAAT 225743 || ||| | | ||| | | | || | ||||||| ||||| | || | | Sbjct 53458 GCTTGATGACGTCCTCCTTGGTGGT---AGTG---ACGTTGGCGTCGGCC-AGCT-TCTT 53509 Query 225744 CATATAC-----------GGTCATGTCCGAGACAGACGCGTCAATGTCGTGGTCCACGTA 225792 |||| | |||||| || | | ||| | ||| | |||||| || ||| | Sbjct 53510 CATAGTCCATTCAATGGTGGTCATCTCAGTGTCAGCAGAGTCCAGGTCGTGCTCGACGAA 53569 Query 225793 CACCGTCCGGAGCTGAGAAGCATCGGGGAAGCCCTCCAGCTGGCCATTTGCAATCGCACG 225852 || ||| || || || | |||||||||||| | ||| | || || ||||| Sbjct 53570 GACAGTCTTGACCTCGGACTGCTTGGGGAAGCCCTCGACCTGTTCGTTGTTGATGGCACG 53629 Query 225853 GAGCAGGGTACTCTTGCCCGCGCCGTTGGGACCGATGAGGCCGTAATGATTCCCGCGCTT 225912 | ||||||| ||| || | || ||||||||| || ||||| | | || ||||| Sbjct 53630 CATCAGGGTAGACTTTCCGGAACCATTGGGACCGCACAGACCGTAGCGCTGACCACGCTT 53689 Query 225913 GATGTTGAGGCGCGTGGAGTTCAGGAGGATCTTGCCACCATAGGCAAGGGAGAACTCGCA 225972 | ||| | || ||| || ||||||||| |||| |||||||||||||| ||| Sbjct 53690 CAGACGCAGGTGAGTCTGGTTAAGCAGGATCTTGGCACCGTAGGCAAGGGAGAAAGTGCA 53749 Query 225973 ATCGCACAGGTCCTCACCCTCCTCG 225997 | |||||| ||||||||||||||| Sbjct 53750 GTTGCACAGATCCTCACCCTCCTCG 53774 >seq105 Length=86313 Score = 134 bits (148), Expect = 3e-26 Identities = 308/459 (67%), Gaps = 10/459 (2%) Strand=Plus/Minus Query 9939 ACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTCGAGG 9998 || || ||||||||||| || || || ||| |||||||| | |||||| |||| Sbjct 44909 ACACCAGCCTTCTGGTAGTCGCCGACACGCTTCTCAAAGAAGTTAGTCTTGCCGCCGAGC 44850 Query 9999 GAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACCGAGT 10058 || ||| |||||||||||| |||||||| ||| | || ||| || || || Sbjct 44849 GAGATGTTCTCCATGAAGTCGAAGGGGTTTGTGGCACGGTACACCTTCTCGTTGCCTAGA 44790 Query 10059 GCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCGAGTTCATG 10118 || | | ||||||||| || ||||| |||||||| ||||||| || | |||||| Sbjct 44789 GCAACAAGCAGGCGGTCAGCAACAAACTCAATGTACTGCTTCATCAGATCAGCGTTCATT 44730 Query 10119 CCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACCGCTTCC 10178 || | || | |||||| | || ||| | ||| ||||| ||| | |||| || || Sbjct 44729 CCTAGCAGACCGCAGGGCAGAGCCTCGGTCAGGAACTCCTTCTCGATCACGACGGCATCA 44670 Query 10179 TCGACGATGCTCTTTACCACGTC----AAGGGACAGCTTGTTCTCGAGCTTCGAATACAG 10234 || ||| | | || | ||| ||| | | |||||| || | ||| |||| Sbjct 44669 GTGATGATCTTTTGCACAAGGTCCTTGCTGGGGC-GGTTGTTC---AGATGCGAGAACAG 44614 Query 10235 GAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTTGGACAAACC 10294 || |||| | ||| |||||||| || || || | |||||| || || Sbjct 44613 CAGGCAAGCAAAGTCGGTGTGCAGGCCCTCATCACGAGAAATAAGCTCGTTTGAGAAGGT 44554 Query 10295 CAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGACCCGGAGAA 10354 |||||| |||||||| || || ||||| |||||||| |||| | ||| | || ||||| Sbjct 44553 CAGACCAGGCATGAGACCACGCTTGCGGAGCCAGAAGATGGAGGCGAAGGCGCCTGAGAA 44494 Query 10355 CAGAAGACCCTCCAC-GCACACCCAGGCGACGAGGCGCT 10392 | | ||||| || ||| | |||| || ||||||| Sbjct 44493 AAAGATGCCCTCGACAGCA-GCAAAGGCAACTAGGCGCT 44456 >seq100 Length=89839 Score = 132 bits (146), Expect = 9e-26 Identities = 142/188 (76%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 || || ||||| || || || || || | ||||| || | |||||| || ||||| || Sbjct 17209 TTCTGAATGTTGTAGTCAGACAGGGTACGGCCATCCTCCAGCTGCTTGCCAGCGAAGATC 17150 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 || | || ||||| || |||||||| |||||||| |||||||| | |||||| ||| Sbjct 17149 AGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACATTGTCG 17090 Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAAT 68453 || ||||| | || || || || | ||| || || || ||||| |||||||||||||| Sbjct 17089 ATAGTGTCCGAGGACTCAACCTCGAGGGTAATCGTCTTACCCGTAAGGGTCTTGACGAAA 17030 Query 68454 ATCTGCAT 68461 |||||||| Sbjct 17029 ATCTGCAT 17022 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921611110125600