Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20manginecans_20[genbank_20GCA_5F000712455.1_202014-06- 26] 980 sequences; 31,706,104 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq105 331 2e-85 seq116 132 9e-26 >seq105 Length=86313 Score = 331 bits (366), Expect = 2e-85 Identities = 604/867 (70%), Gaps = 42/867 (5%) Strand=Plus/Plus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| |||||||||||||| || |||| |||||| || ||||||||||| ||| Sbjct 44053 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCCTTCTGGACTGCTGAGGAGATTGATCTG 44112 Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGAA----CGAAAAGTTTTTCCTCAA 42415 | ||||| || |||| | || |||||| | ||| ||| ||| || Sbjct 44113 TCTAAGGATCTCCACGACTGGAACA-ACCGTCTGAACAAAGACGAGCAGTACTTCATCTC 44171 Query 42416 AAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAG 42475 |||| || |||||||| || |||||||| ||||| ||||| || || || | | Sbjct 44172 CCACATTCTTGCCTTCTTTGCTGCCTCTGATGGCATCGTCAACGAAAATCTCGTTGAGCG 44231 Query 42476 GTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCAT 42535 ||| ||||||||| | ||||| |||||||||||||| |||||||| || Sbjct 44232 CTTCTCAGGCGAGGTGCAGATCCCCGAGGCCCGCTGCTTCTACGGTTTCCAGATCATGAT 44291 Query 42536 AGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGT 42595 || ||| | |||||||| ||| | ||| | |||| |||||| ||| ||| | Sbjct 44292 GGAAAACATCCACTCTGAAACCTACTCGCTGCTGATTGACACCTACATCAAGGAGCCC-T 44350 Query 42596 CG-AGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGG 42654 || |||| | |||||||| ||||| || || || ||||||||| ||||| | Sbjct 44351 CGCAGCGCACATACCTGTTCAATGCCATTGACACTATTCCCTGCATCCGCCGCAAGGCCG 44410 Query 42655 ACTGGGCGCTCAACTGGATCGAGAGTCCCGACG-CAACGTTCGGCGAGAGGCTGGTAGCC 42713 ||||||| || || |||||| | | | | | | ||||| | | || | || || ||| Sbjct 44411 ACTGGGCTCTGAAGTGGATC-ACCGACAAGGAGTCGACGTTTGCCCAGCGCCTAGTTGCC 44469 Query 42714 TTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCT---C 42770 ||| | || |||||||||||||| ||||| |||||||||||||||||||||||||| | Sbjct 44470 TTTGCTGCTGTCGAGGGCATCTTTTTCTCAGGCGCCTTCGCCTCCATCTTCTGGCTCCGC 44529 Query 42771 AAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAG 42830 |||| ||| || ||||| || || |||||||| ||||| || || | || ||| Sbjct 44530 AAGC--GTGGTCTC-ATGCCTGGTCTGACCTTCTCAAACGAGCTTATTTCTCGTGATGAG 44586 Query 42831 GGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAA--GCCCT 42888 || ||||| | |||||||| ||||| ||||||||| || || | |||| |||| Sbjct 44587 GGCCTGCACACCGACTTTGCTTGCCTGCTGTTCTCG---CATCT---GAACAACCGCCCC 44640 Query 42889 CG-AAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTC 42947 | ||||| | || | |||||||| || ||||| | |||||||||||||||||| Sbjct 44641 AGCAAGGACCTTGTGCAAAAGATCATCACTGATGCCGTCGTGATCGAGAAGGAGTTCCTG 44700 Query 42948 ACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATC 43007 || || | |||||| ||| | || |||||| || || ||| ||||||| Sbjct 44701 ACCGAGGCTCTGCCCTGCGGTCTGCTAGGAATGAACGCTGATCTGATGAAGCAGTACATT 44760 Query 43008 CAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGCCGCCTCTACAACACG--C 43065 ||| || || |||| || || || | | ||| || || | | || | | Sbjct 44761 GAGTTTGTTGCTGACCGCCTGCT-TG-----TTGCTCT-AG--GCAACGAGAAGGTGTAC 44811 Query 43066 CGTG-------CCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTT 43118 |||| |||||||||||| ||||||||||||||| | | |||||||| ||||| Sbjct 44812 CGTGCCACAAACCCCTTCGACTTCATGGAGAACATCTCGCTCGGCGGCAAGACTAACTTC 44871 Query 43119 TTCGAGAAGCGCGTCGCCGACTACCAG 43145 || |||||||| |||| |||||||||| Sbjct 44872 TTTGAGAAGCGTGTCGGCGACTACCAG 44898 >seq116 Length=83673 Score = 132 bits (146), Expect = 9e-26 Identities = 827/1319 (63%), Gaps = 43/1319 (3%) Strand=Plus/Plus Query 244090 GTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGG 244149 ||| || ||||| ||||| || | || |||||||||||||| | |||| || || Sbjct 75606 GTTGACGACCTGGAACTCGCCAGCAAGAACGCGGCGCTGGTAAATGTTGGATGTGTAGGG 75665 Query 244150 CTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACAC 244209 |||| || ||| |||||||||| ||||||| |||||| || || |||||||| | || Sbjct 75666 TTCGAAGCACTCATTGTTGCCCAGAATCTGCGACGTGCTGGCTGTAGGCATGGGTGCAAC 75725 Query 244210 CAGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCA 244269 || ||| || | || || ||| || || | || |||||||||| Sbjct 75726 TAGAAGAGAATTGCGTACACCATGCTGCTTAATCTTCTCCTTTAGAGAAGTCCAGTCCCA 75785 Query 244270 CATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCT 244329 || | | ||| || | | ||||||| |||||||||| | || | | Sbjct 75786 CA-GATCACTAGGAG-TCACAT-------CCCACATATCAAACTGCAAGATGCCTTGGGA 75836 Query 244330 GACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTC 244389 ||| || ||||| || || | ||| | ||| || |||||| | || || | Sbjct 75837 GACAGGAGAACCCTCATAAGTTGAGTAAGTACCCTCCGTCTGGGCGAT-TTCCAT-TGAA 75894 Query 244390 GTCG--AGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTG 244447 | | || ||||||| ||||||||| || || ||| |||||| | | ||| || | Sbjct 75895 GCAGTTAGTGCGGCGTGGTAGATGGTTTCAAAAATCTGCTTGTTGAGCTGGCGTGCTTCA 75954 Query 244448 CCGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATG 244507 | | || || |||| | | ||| |||| ||||| ||||| || |||| Sbjct 75955 GGGGATTCAAAAGGCATGCGGAGAGCAAGGAAAGCGTCAGCCAGGCCCTGTACACCGACA 76014 Query 244508 CCGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCG 244567 || ||||| | ||| ||| ||||| | ||||| | || ||||| || | Sbjct 76015 CCAATGGGACGGTGGCGCATGTTGCTGTTGTGAGCTTCCTGGACAGGGTAGTGATTCACA 76074 Query 244568 TCGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAG 244627 ||||| | ||| |||||||| | | || ||| ||| ||| | |||| Sbjct 76075 TCGATGATGCGGTTTAGGTTGCGAACAACAACTTGGGTGACTTCGTGTAGCTTTTTAAAG 76134 Query 244628 TCGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTG 244687 || ||||| | ||| | | || ||| || || ||||| | Sbjct 76135 TCATACTC------ACCCTTG----TTGTAGTCC--ACGAAGGAAGGAAGGGCTAGAGAT 76182 Query 244688 GCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGG 244747 || |||||||| || || ||||| || | | ||||| || |||||| ||||| ||| Sbjct 76183 GCTAGGTTGCACACAGCGACCTCATCAGGGGCACAGTACTCGATAATCTCAGTGCACAGG 76242 Query 244748 TT---ACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCC 244804 || ||||| ||||| || || | | |||||| |||| ||||||| ||| Sbjct 76243 TTCGAACTGCGA---ATGGTACCTAGATTTTTCTGATTGCTCTTGCGGTTGCAGTGGTCT 76299 Query 244805 TTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGG 244864 ||||||||||| || || || ||||| ||| || | || | | | ||| || Sbjct 76300 TTGTAGAGCATAAAAGGGTTGCCAGTCTCAGTCTGAGCCTCCAGAATGGCATACCACAGT 76359 Query 244865 TCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCC 244924 | | |||||||| | ||||| | ||||| |||||| ||||| ||| Sbjct 76360 TTCTGGGCCTTGACAACCATGCGACCGCGACCCTCCTTCTCGTACTTTTCATACAGAGCC 76419 Query 244925 TCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTC 244984 || ||||| ||| || || | | ||||||||| |||||||||||| || Sbjct 76420 TCAAACTCTTCGCCATAGCAATCCGCCAAGCCGGGGCATTCATTGGGGCACATGAGAGTC 76479 Query 244985 CACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAG 245044 || || | | || || | || |||||| | |||| |||||| |||||| ||| Sbjct 76480 CAGTCCTCATTCTTCTCAACACGCTTCATGAACAAGTCGCAGATCCACAGGGCCAAGAAT 76539 Query 245045 AGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAG 245104 ||||| | | | || ||| || |||||| | | || | || || ||| Sbjct 76540 AGGTCACGAGCACGGACTTCTTCCTTTCCGTGGTTCTTGCGTAAGTCGAGGAACTCGAAG 76599 Query 245105 ACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCC 245164 || || | ||||| ||||| | || | || | ||| || || |||||||| || ||| Sbjct 76600 ACATCAGCATGCCATGGCTCGAGATAAATGGCAAAGGCTCCAGGTCGCTTGTTTCCACCC 76659 Query 245165 TGGTCCACCATCCTCTCGAGCG----CGTTGAAGATGCGCAGGGTAGGCACTATGCCGTT 245220 |||| || | | || ||| |||||| | || || | || || |||||||| Sbjct 76660 TGGT----CAACATAACGGGCGGTGTTGTTGAAAACACGTAGCATGGGAACGATGCCGTT 76715 Query 245221 AGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCC--TGAGGTTGCTGATGGAC 245278 || ||||| ||||| ||||| | ||| || | | | | || || || Sbjct 76716 CGAAGTACCGTTAGTGCCAGCAATGTAAGAGCCAGTGGCACGAATACGGTGAACATTGAG 76775 Query 245279 ATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATG 245338 | || | || || || |||||| || | ||| || |||||| ||| || ||| Sbjct 76776 A--CCGATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCGTAAATG 76833 Query 245339 CCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGG 245397 ||||| |||||||| |||||||| || || || || || |||| ||| | || ||| Sbjct 76834 CCCTCGATGCTGTCATCCTTCATGTCGACTAGGAAACATGAAGACAACTGAGCCTGGGG 76892 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944327631844800