Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20manginecans_20[genbank_20GCA_5F000712455.1_202014-06-
26] 980 sequences; 31,706,104 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq105 331 2e-85
seq116 132 9e-26
>seq105
Length=86313
Score = 331 bits (366), Expect = 2e-85
Identities = 604/867 (70%), Gaps = 42/867 (5%)
Strand=Plus/Plus
Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359
|||||| |||||||||||||| || |||| |||||| || ||||||||||| |||
Sbjct 44053 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCCTTCTGGACTGCTGAGGAGATTGATCTG 44112
Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGAA----CGAAAAGTTTTTCCTCAA 42415
| ||||| || |||| | || |||||| | ||| ||| ||| ||
Sbjct 44113 TCTAAGGATCTCCACGACTGGAACA-ACCGTCTGAACAAAGACGAGCAGTACTTCATCTC 44171
Query 42416 AAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAG 42475
|||| || |||||||| || |||||||| ||||| ||||| || || || | |
Sbjct 44172 CCACATTCTTGCCTTCTTTGCTGCCTCTGATGGCATCGTCAACGAAAATCTCGTTGAGCG 44231
Query 42476 GTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCAT 42535
||| ||||||||| | ||||| |||||||||||||| |||||||| ||
Sbjct 44232 CTTCTCAGGCGAGGTGCAGATCCCCGAGGCCCGCTGCTTCTACGGTTTCCAGATCATGAT 44291
Query 42536 AGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGT 42595
|| ||| | |||||||| ||| | ||| | |||| |||||| ||| ||| |
Sbjct 44292 GGAAAACATCCACTCTGAAACCTACTCGCTGCTGATTGACACCTACATCAAGGAGCCC-T 44350
Query 42596 CG-AGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGG 42654
|| |||| | |||||||| ||||| || || || ||||||||| ||||| |
Sbjct 44351 CGCAGCGCACATACCTGTTCAATGCCATTGACACTATTCCCTGCATCCGCCGCAAGGCCG 44410
Query 42655 ACTGGGCGCTCAACTGGATCGAGAGTCCCGACG-CAACGTTCGGCGAGAGGCTGGTAGCC 42713
||||||| || || |||||| | | | | | | ||||| | | || | || || |||
Sbjct 44411 ACTGGGCTCTGAAGTGGATC-ACCGACAAGGAGTCGACGTTTGCCCAGCGCCTAGTTGCC 44469
Query 42714 TTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCT---C 42770
||| | || |||||||||||||| ||||| |||||||||||||||||||||||||| |
Sbjct 44470 TTTGCTGCTGTCGAGGGCATCTTTTTCTCAGGCGCCTTCGCCTCCATCTTCTGGCTCCGC 44529
Query 42771 AAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAG 42830
|||| ||| || ||||| || || |||||||| ||||| || || | || |||
Sbjct 44530 AAGC--GTGGTCTC-ATGCCTGGTCTGACCTTCTCAAACGAGCTTATTTCTCGTGATGAG 44586
Query 42831 GGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAA--GCCCT 42888
|| ||||| | |||||||| ||||| ||||||||| || || | |||| ||||
Sbjct 44587 GGCCTGCACACCGACTTTGCTTGCCTGCTGTTCTCG---CATCT---GAACAACCGCCCC 44640
Query 42889 CG-AAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTC 42947
| ||||| | || | |||||||| || ||||| | ||||||||||||||||||
Sbjct 44641 AGCAAGGACCTTGTGCAAAAGATCATCACTGATGCCGTCGTGATCGAGAAGGAGTTCCTG 44700
Query 42948 ACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATC 43007
|| || | |||||| ||| | || |||||| || || ||| |||||||
Sbjct 44701 ACCGAGGCTCTGCCCTGCGGTCTGCTAGGAATGAACGCTGATCTGATGAAGCAGTACATT 44760
Query 43008 CAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGCCGCCTCTACAACACG--C 43065
||| || || |||| || || || | | ||| || || | | || | |
Sbjct 44761 GAGTTTGTTGCTGACCGCCTGCT-TG-----TTGCTCT-AG--GCAACGAGAAGGTGTAC 44811
Query 43066 CGTG-------CCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTT 43118
|||| |||||||||||| ||||||||||||||| | | |||||||| |||||
Sbjct 44812 CGTGCCACAAACCCCTTCGACTTCATGGAGAACATCTCGCTCGGCGGCAAGACTAACTTC 44871
Query 43119 TTCGAGAAGCGCGTCGCCGACTACCAG 43145
|| |||||||| |||| ||||||||||
Sbjct 44872 TTTGAGAAGCGTGTCGGCGACTACCAG 44898
>seq116
Length=83673
Score = 132 bits (146), Expect = 9e-26
Identities = 827/1319 (63%), Gaps = 43/1319 (3%)
Strand=Plus/Plus
Query 244090 GTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGG 244149
||| || ||||| ||||| || | || |||||||||||||| | |||| || ||
Sbjct 75606 GTTGACGACCTGGAACTCGCCAGCAAGAACGCGGCGCTGGTAAATGTTGGATGTGTAGGG 75665
Query 244150 CTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACAC 244209
|||| || ||| |||||||||| ||||||| |||||| || || |||||||| | ||
Sbjct 75666 TTCGAAGCACTCATTGTTGCCCAGAATCTGCGACGTGCTGGCTGTAGGCATGGGTGCAAC 75725
Query 244210 CAGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCCA 244269
|| ||| || | || || ||| || || | || ||||||||||
Sbjct 75726 TAGAAGAGAATTGCGTACACCATGCTGCTTAATCTTCTCCTTTAGAGAAGTCCAGTCCCA 75785
Query 244270 CATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCT 244329
|| | | ||| || | | ||||||| |||||||||| | || | |
Sbjct 75786 CA-GATCACTAGGAG-TCACAT-------CCCACATATCAAACTGCAAGATGCCTTGGGA 75836
Query 244330 GACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTC 244389
||| || ||||| || || | ||| | ||| || |||||| | || || |
Sbjct 75837 GACAGGAGAACCCTCATAAGTTGAGTAAGTACCCTCCGTCTGGGCGAT-TTCCAT-TGAA 75894
Query 244390 GTCG--AGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTG 244447
| | || ||||||| ||||||||| || || ||| |||||| | | ||| || |
Sbjct 75895 GCAGTTAGTGCGGCGTGGTAGATGGTTTCAAAAATCTGCTTGTTGAGCTGGCGTGCTTCA 75954
Query 244448 CCGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATG 244507
| | || || |||| | | ||| |||| ||||| ||||| || ||||
Sbjct 75955 GGGGATTCAAAAGGCATGCGGAGAGCAAGGAAAGCGTCAGCCAGGCCCTGTACACCGACA 76014
Query 244508 CCGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCG 244567
|| ||||| | ||| ||| ||||| | ||||| | || ||||| || |
Sbjct 76015 CCAATGGGACGGTGGCGCATGTTGCTGTTGTGAGCTTCCTGGACAGGGTAGTGATTCACA 76074
Query 244568 TCGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAG 244627
||||| | ||| |||||||| | | || ||| ||| ||| | ||||
Sbjct 76075 TCGATGATGCGGTTTAGGTTGCGAACAACAACTTGGGTGACTTCGTGTAGCTTTTTAAAG 76134
Query 244628 TCGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTG 244687
|| ||||| | ||| | | || ||| || || ||||| |
Sbjct 76135 TCATACTC------ACCCTTG----TTGTAGTCC--ACGAAGGAAGGAAGGGCTAGAGAT 76182
Query 244688 GCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGG 244747
|| |||||||| || || ||||| || | | ||||| || |||||| ||||| |||
Sbjct 76183 GCTAGGTTGCACACAGCGACCTCATCAGGGGCACAGTACTCGATAATCTCAGTGCACAGG 76242
Query 244748 TT---ACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCC 244804
|| ||||| ||||| || || | | |||||| |||| ||||||| |||
Sbjct 76243 TTCGAACTGCGA---ATGGTACCTAGATTTTTCTGATTGCTCTTGCGGTTGCAGTGGTCT 76299
Query 244805 TTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGG 244864
||||||||||| || || || ||||| ||| || | || | | | ||| ||
Sbjct 76300 TTGTAGAGCATAAAAGGGTTGCCAGTCTCAGTCTGAGCCTCCAGAATGGCATACCACAGT 76359
Query 244865 TCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCC 244924
| | |||||||| | ||||| | ||||| |||||| ||||| |||
Sbjct 76360 TTCTGGGCCTTGACAACCATGCGACCGCGACCCTCCTTCTCGTACTTTTCATACAGAGCC 76419
Query 244925 TCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAGACTC 244984
|| ||||| ||| || || | | ||||||||| |||||||||||| ||
Sbjct 76420 TCAAACTCTTCGCCATAGCAATCCGCCAAGCCGGGGCATTCATTGGGGCACATGAGAGTC 76479
Query 244985 CACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAG 245044
|| || | | || || | || |||||| | |||| |||||| |||||| |||
Sbjct 76480 CAGTCCTCATTCTTCTCAACACGCTTCATGAACAAGTCGCAGATCCACAGGGCCAAGAAT 76539
Query 245045 AGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAG 245104
||||| | | | || ||| || |||||| | | || | || || |||
Sbjct 76540 AGGTCACGAGCACGGACTTCTTCCTTTCCGTGGTTCTTGCGTAAGTCGAGGAACTCGAAG 76599
Query 245105 ACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCC 245164
|| || | ||||| ||||| | || | || | ||| || || |||||||| || |||
Sbjct 76600 ACATCAGCATGCCATGGCTCGAGATAAATGGCAAAGGCTCCAGGTCGCTTGTTTCCACCC 76659
Query 245165 TGGTCCACCATCCTCTCGAGCG----CGTTGAAGATGCGCAGGGTAGGCACTATGCCGTT 245220
|||| || | | || ||| |||||| | || || | || || ||||||||
Sbjct 76660 TGGT----CAACATAACGGGCGGTGTTGTTGAAAACACGTAGCATGGGAACGATGCCGTT 76715
Query 245221 AGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCC--TGAGGTTGCTGATGGAC 245278
|| ||||| ||||| ||||| | ||| || | | | | || || ||
Sbjct 76716 CGAAGTACCGTTAGTGCCAGCAATGTAAGAGCCAGTGGCACGAATACGGTGAACATTGAG 76775
Query 245279 ATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATG 245338
| || | || || || |||||| || | ||| || |||||| ||| || |||
Sbjct 76776 A--CCGATACCACCAGCCATCTTGGAAATCATGGCACAAGTCTTGAGGGTATCGTAAATG 76833
Query 245339 CCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGG 245397
||||| |||||||| |||||||| || || || || || |||| ||| | || |||
Sbjct 76834 CCCTCGATGCTGTCATCCTTCATGTCGACTAGGAAACATGAAGACAACTGAGCCTGGGG 76892
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944327631844800
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