Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20manginecans_20[genbank_20GCA_5F000712455.1_202014-06-
26] 980 sequences; 31,706,104 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq105 111 3e-19
seq106 93.3 9e-14
>seq105
Length=86313
Score = 111 bits (122), Expect = 3e-19
Identities = 174/249 (70%), Gaps = 0/249 (0%)
Strand=Plus/Plus
Query 243502 ATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGG 243561
|||||||| || || || | | ||| ||||| ||| | ||| ||| | || ||| |
Sbjct 44662 ATCATCACTGATGCCGTCGTGATCGAGAAGGAGTTCCTGACCGAGGCTCTGCCCTGCGGT 44721
Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621
|| | || |||||| |||| || ||| |||||||| || || || || |||||| |
Sbjct 44722 CTGCTAGGAATGAACGCTGATCTGATGAAGCAGTACATTGAGTTTGTTGCTGACCGCCTG 44781
Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681
| | || || || | ||||| |||||| ||| |||||||| | ||| ||||||
Sbjct 44782 CTTGTTGCTCTAGGCAACGAGAAGGTGTACCGTGCCACAAACCCCTTCGACTTCATGGAG 44841
Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAACGC 243741
||| ||||| || || ||||||||||| || ||||||||| | || || ||
Sbjct 44842 AACATCTCGCTCGGCGGCAAGACTAACTTCTTTGAGAAGCGTGTCGGCGACTACCAGAAG 44901
Query 243742 CCTGGTGTG 243750
||||||||
Sbjct 44902 GCTGGTGTG 44910
>seq106
Length=86074
Score = 93.3 bits (102), Expect = 9e-14
Identities = 245/362 (68%), Gaps = 24/362 (7%)
Strand=Plus/Plus
Query 333641 ACCCTCGAGGAACCCGGGCTCGGGGAACTTCCACGTGGTCTTCGTCTCGGTAAGGGCGTA 333700
|||||| ||||| |||||||||||||| | || | ||| | | ||| ||||
Sbjct 53060 ACCCTCAAGGAAACCGGGCTCGGGGAAGGTGAACTCGATCTCGGAGGCACCAAGTTCGTA 53119
Query 333701 GTA--ACTCG-CTGATTCGGGACGCTTCTTCACGAACTCGGACAGATTTCCCTTGTACTT 333757
||| ||| | | || ||| | |||||| || ||||||| ||| || || |||
Sbjct 53120 GTATGACTTGGCCGA---GGGGCACTTCTTGACAAACTCGGCCAGGTTACCACGGTAACG 53176
Query 333758 CTTCAGCTTTAGGTTAGGTTCGTAATGGATAATAGAGGTG-CAAACAGCGTCGAGGAACC 333816
||| ||||| | | | ||||| |||| ||| | | || || || ||| ||||| |
Sbjct 53177 CTTAAGCTTGAAGC---GCTCGTAGTGGACAAT-GTGCTGGCAGACGTTGTCAAGGAAGC 53232
Query 333817 CGGAGTCGTGTGACACAATCACGCACGAAACGTCCTTAAGG----TTGATCAGGTATTCA 333872
| |||||||| || || || | | ||| || | |||| ||| |||||| ||
Sbjct 53233 CAGAGTCGTGAGAGACGATAATG---GAA--GTGC--AAGGAGAGTTGCACAGGTAGTCC 53285
Query 333873 ATCAGCCACCTCACGTTAGACACAGAAAGATGGTTGGTCGGCTCGTCAAGAAGTAGTAGC 333932
||||||| | ||||| |||| ||||||||||| |||||||||||||| || |
Sbjct 53286 TCCAGCCACTTGACGTTCTTCACATCCAGATGGTTGGTAGGCTCGTCAAGAAGCAGGATA 53345
Query 333933 TTTGCGTTCAGGAGCATTGCACGTGCA-AGAGCGAGTTTCATTTTCCACCCTCCTGAAAG 333991
| | | || | ||||| ||| ||||| || ||||| ||||| || || |||||
Sbjct 53346 TCAGGAGCCTCGAAAACGGCACG-GCACAGAGCCAGCTTCATCTTCCAACCACCAGAAAG 53404
Query 333992 AG 333993
||
Sbjct 53405 AG 53406
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102866151963000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |