Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20manginecans_20[genbank_20GCA_5F000712455.1_202014-06- 26] 980 sequences; 31,706,104 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq28 87.8 2e-12 seq100 86.0 6e-12 >seq28 Length=151797 Score = 87.8 bits (96), Expect = 2e-12 Identities = 103/137 (75%), Gaps = 2/137 (1%) Strand=Plus/Minus Query 45195 TGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATT 45254 || ||||| ||| | || | || ||||||||||| |||||||| || || || || || Sbjct 108467 TGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATC 108408 Query 45255 TTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCC 45313 || |||| || | || | ||||||||| |||||||||||||| |||| || || || Sbjct 108407 TTGGACTTGA-CGTTGTCAATGGTGTCGGAGGACTCGACTTCGAGGGTAATGGTCTTTCC 108349 Query 45314 GGTTAGAGTTTTTACAA 45330 ||| || || || |||| Sbjct 108348 GGTAAGGGTCTTGACAA 108332 >seq100 Length=89839 Score = 86.0 bits (94), Expect = 6e-12 Identities = 113/157 (72%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 45185 ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTT 45244 ||| |||| || || || ||| | |||| || ||||||||||| |||||||| || || Sbjct 17177 ATCCTCCAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTT 17118 Query 45245 ATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304 || ||||| || |||| || | ||||| || ||||| || ||||| |||| Sbjct 17117 GTCCTGAATCTTGGACTTGACATTGTCGATAGTGTCCGAGGACTCAACCTCGAGGGTAAT 17058 Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 ||| || || || || || || || ||||| |||||| Sbjct 17057 CGTCTTACCCGTAAGGGTCTTGACGAAAATCTGCATC 17021 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451997662960800