Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ceratocystis_20manginecans_20[genbank_20GCA_5F000712455.1_202014-06-
26] 980 sequences; 31,706,104 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq28 87.8 2e-12
seq100 86.0 6e-12
>seq28
Length=151797
Score = 87.8 bits (96), Expect = 2e-12
Identities = 103/137 (75%), Gaps = 2/137 (1%)
Strand=Plus/Minus
Query 45195 TGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATT 45254
|| ||||| ||| | || | || ||||||||||| |||||||| || || || || ||
Sbjct 108467 TGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGGATC 108408
Query 45255 TTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCC 45313
|| |||| || | || | ||||||||| |||||||||||||| |||| || || ||
Sbjct 108407 TTGGACTTGA-CGTTGTCAATGGTGTCGGAGGACTCGACTTCGAGGGTAATGGTCTTTCC 108349
Query 45314 GGTTAGAGTTTTTACAA 45330
||| || || || ||||
Sbjct 108348 GGTAAGGGTCTTGACAA 108332
>seq100
Length=89839
Score = 86.0 bits (94), Expect = 6e-12
Identities = 113/157 (72%), Gaps = 0/157 (0%)
Strand=Plus/Minus
Query 45185 ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTT 45244
||| |||| || || || ||| | |||| || ||||||||||| |||||||| || ||
Sbjct 17177 ATCCTCCAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTT 17118
Query 45245 ATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304
|| ||||| || |||| || | ||||| || ||||| || ||||| ||||
Sbjct 17117 GTCCTGAATCTTGGACTTGACATTGTCGATAGTGTCCGAGGACTCAACCTCGAGGGTAAT 17058
Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
||| || || || || || || || ||||| ||||||
Sbjct 17057 CGTCTTACCCGTAAGGGTCTTGACGAAAATCTGCATC 17021
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451997662960800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |