Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20manginecans_20[genbank_20GCA_5F000712455.1_202014-06- 26] 980 sequences; 31,706,104 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq116 145 9e-30 seq105 122 1e-22 >seq116 Length=83673 Score = 145 bits (160), Expect = 9e-30 Identities = 845/1335 (63%), Gaps = 30/1335 (2%) Strand=Plus/Plus Query 115563 GTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTT 115622 ||||||||| ||||||||||| || | |||||| || | ||||| || | ||| Sbjct 75306 GTAGTACATGCCCGTCTTGAGACCTAGTTTCCAGCCAGCAAAGTGCATGCTGGTGATCTT 75365 Query 115623 GGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCC 115682 | | || ||| || |||| | ||| | | || ||||| || ||||| || Sbjct 75366 GCCCATGGTAGGATCTTTCATGTGAATGTTTAGAGACTGCGATTGGTCAATGAAAGCACC 75425 Query 115683 CCGATCCGCCGCCATATCAATCACATCCTTCATCTTG---ATTTCCCACACAGTTCTGTA 115739 ||||| || ||||| | |||| | | || | || ||||| || || |||| Sbjct 75426 ACGATCAGCAGCCATTTG---CACAACTGTACGCTGGGAAATCTCCCAAACGGTCTTGTA 75482 Query 115740 GAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCCTTGAC 115799 || ||||||||| | || || ||| || || || |||||| || | Sbjct 75483 CAGAGCTTTAATATCAGCAGGAATGCTAGAGATGTTCTGAATGGAGCCATTGTCCGCAAT 75542 Query 115800 CATGAGATCCTTCATATCCTTTGACCAGAGACCAA--TCTTCTTGAGATCCTCCACG-AG 115856 ||| ||| |||||||| | ||||| | ||||| || || || || ||| || Sbjct 75543 AATGCGATTCTTCATATTGTCAGACCATAAACCAAGATCGACT--AGGTC----ACGTAG 75596 Query 115857 GTGCTTA---TTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGT 115913 | || ||||| || ||||| || || || ||| | | | || ||||||| Sbjct 75597 GAGCCAGGGGTTGACGACCTGGAACTCGCCAGCAAGAACGCGGCGCTGGTAAATGTTGGA 75656 Query 115914 CGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCAT 115973 ||||| || || |||||||||||||| |||| || || | ||| |||||| ||||| Sbjct 75657 TGTGTAGGGTTCGAAGCACTCATTGTTGCCCAGAATCTGCGACGTGCTGGCTGTAGGCAT 75716 Query 115974 GGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTC 116033 |||||| | ||||| ||||| | ||| | | |||| ||||| || | Sbjct 75717 GGGTGCAACTAGAAGAGAATTGCGTACACCATGCTGCTTAATCTTCTCCTTTAGAGAAGT 75776 Query 116034 CCAGTCGTA--GTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGG 116091 |||||| | | | | || | || | ||||||||||||||||| | ||| |||||| Sbjct 75777 CCAGTCCCACAGATCA-CTAGGAGTCACA-TCCCACATATCAAACTGCAAGATGCCTTGG 75834 Query 116092 GACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTC 116151 || | || || |||||| | || || | ||||| || || | ||| Sbjct 75835 GAGACAGGAGAACCCTCATAAGTTGAGTAAGTACCCTCCGTCTGGGCGATTTCCATTGAA 75894 Query 116152 GCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCAT-TGCCTTGGCCTC 116210 || || || ||||| || || || |||||||| | || | || | || | || Sbjct 75895 GCAGTTAGTGCGGCGTGGTAGATGGTTTCAAAAATCTGCTTGTTGAGCTGGCGTG-CTTC 75953 Query 116211 GTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAG 116270 ||| ||||| | | ||| || || | || || || || || ||||||| Sbjct 75954 AGGGGATTCAAAAGGCATGCGGAGAGCAAGGAAAGCGTCAGCCAGGCCCTGTACACCGAC 76013 Query 116271 GCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCT 116330 ||||| || || || | ||| || || |||| || || || || |||| Sbjct 76014 ACCAATGGGACGGTGGCGCATGTTGCTGTTGTGAGCTTCCTGGACAGGGTAGTGATTCAC 76073 Query 116331 ATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTA 116390 |||||| | | ||||| || ||||| | |||| ||| || ||||||| | Sbjct 76074 ATCGATGATGCGGTTTAGGTTGCGAACAACAACTTGGGTGACTTCGTGTAGCTTTTTAAA 76133 Query 116391 ATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACA 116450 ||| | | | | | | || | ||||||||| | || || || || || Sbjct 76134 GTCATACTCACCCTTGTTGTAGTCCACGAAGGAAGGAAGGGCTAGAGATGCTAGGTTGCA 76193 Query 116451 CACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTT 116510 ||||| | |||||| || |||||| ||||| || || |||| || ||||| Sbjct 76194 CACAGCGACCTCATCAGGGGCACAGTACTCGATAATCTCAGTGCACAGGTTCGAACTGCG 76253 Query 116511 AATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATA 116570 |||||| || | || || ||||| ||| ||| || || |||||||||||| | Sbjct 76254 AATGGTACCTAGATTTTTCTGATTGCTCTTGCGGTTGCAGTGGTCTTTGTAGAGCATAAA 76313 Query 116571 TGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATACAT-CGGCGGCTGGCA 116629 || | || ||||| || || | || ||||| || | ||| | | | | | || | | Sbjct 76314 AGGGTTGCCAGTCTCAGTCTGAGCCTCCAGAATGGCATACCACAGTTTCTGGGCCTTG-A 76372 Query 116630 CAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCAC 116689 || | | || ||||||| |||||||||| || || |||||||||||||| | Sbjct 76373 CAACCATGCGACCGCGACCCTCCTTCTCGTACTTTTCATACAGAGCCTCAAACTCTTCGC 76432 Query 116690 CCACAGCC-TCTGAGAGCCCTGGTGCCTT-ATCTGGACAGAAGAGAGACCATTGACCACC 116747 | | ||| || | | || || || || || || || | ||||| ||| | || Sbjct 76433 C-ATAGCAATCCGCCAAGCCGGG-GCATTCATTGGGGCACATGAGAGTCCAGTCCTCATT 76490 Query 116748 CTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACA 116807 || |||||| ||||||||||| | ||| |||||| || ||| |||| || || ||| Sbjct 76491 CTTCTCAACACGCTTCATGAACAAGTCGCAGATCCACAGGGCCAAGAATAGGTCACGAGC 76550 Query 116808 GCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTG 116867 || ||||||| | || || || || || || | || || | || ||| || || Sbjct 76551 ACGGACTTCTTCCTTTCCGTGGTTCTTGCGTAAGTCGAGGAACTCGAAGACATCAGCATG 76610 Query 116868 CCACGGTTCCAGGTA 116882 ||| || || || || Sbjct 76611 CCATGGCTCGAGATA 76625 >seq105 Length=86313 Score = 122 bits (134), Expect = 1e-22 Identities = 343/521 (66%), Gaps = 7/521 (1%) Strand=Plus/Minus Query 127519 AGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 127578 |||||| || ||| || ||||| ||||| || || || || || |||||| |||||| Sbjct 44607 AGCAAAGTCGGTGTGCAGGCCCTCATCACGAGAAATAAGCTCGTTTGAGAAGGTCAGACC 44548 Query 127579 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 127638 ||||||||||| ||||| | |||||| || | || | ||| ||||| ||||| Sbjct 44547 AGGCATGAGACCACGCTTGCGGAGCCAGAAGATGGAGGCGAAGGCGCCTGAGAAAAAGAT 44488 Query 127639 CCCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGT-ATCAA 127697 ||||| ||| || || |||| ||| |||| |||||| | || | |||| | Sbjct 44487 GCCCTCGACAGCAGCAAAGGCAACTAGGCGCTGGGCAAACG-TCGACTCCTTGTCGGTGA 44429 Query 127698 ACCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAA 127757 |||||||| ||||| | ||||| ||| || || | || | || || | | Sbjct 44428 TCCACTTCAGAGCCCAGTCGGCCTTGCGGCGGATGCAGGGAATAGTGTCAATGGCATTGA 44369 Query 127758 AGAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTT 127817 | || | | | || || || |||||||| | || || || || || |||| Sbjct 44368 ACAGGTATGTGCGCTGCGAGGGCTCCTTGATGTAGGTGTCAATCAGCAGCGAGTAGGTTT 44309 Query 127818 CGCCGTGGACCATTT-CATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATC 127876 | ||||| ||| ||| || | ||| | ||||||| |||| || ||| ||| Sbjct 44308 CAGAGTGGATGTTTTCCATCAT-GATCTGGAAACCGTAGAAGCAGCGGGCCTCGGGGATC 44250 Query 127877 TGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCA 127936 || ||||| | | || | | || ||| || || || ||||| || ||||| Sbjct 44249 TGCACCTCGCCTGAGAAGCGCTCAACGAGATTTTCGTTGACGATGCCATCAGAGGCAGCA 44190 Query 127937 AAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAG 127993 || || || || || | ||||| | ||| || | | ||||| || | |||||| Sbjct 44189 AAGAAGGCAAGAATGTGGGAGATGAAGTACTGCTCGTCTTTGTTCAGACGGTTGTTCCAG 44130 Query 127994 TCGTCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034 |||| ||||||||| || ||||| | |||||| |||||||| Sbjct 44129 TCGTGGAGATCCTTAGACAGATCAATCTCCTCAGCAGTCCA 44089 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613499684536800