Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20manginecans_20[genbank_20GCA_5F000712455.1_202014-06- 26] 980 sequences; 31,706,104 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq105 275 6e-69 seq28 134 1e-26 seq100 91.5 1e-13 seq61 87.8 2e-12 >seq105 Length=86313 Score = 275 bits (304), Expect = 6e-69 Identities = 501/729 (69%), Gaps = 11/729 (2%) Strand=Plus/Minus Query 132718 ACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCC 132777 || ||||| | ||| || || ||||| ||||| ||| ||| || || | ||| Sbjct 44786 ACAAGCAGGCGGTCAGCAACAAACTCAATGTACTGCTTCATCAGATCAGCGTTCATTCCT 44727 Query 132778 AGCAGAC-GCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGT 132836 ||||||| ||| ||||| || ||||| || || | |||||| |||| || || || Sbjct 44726 AGCAGACCGCAG-GGCAGAGCCTCGGTCAGGAACTCCTTCTCGATCACGACGGCATCAGT 44668 Query 132837 GACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCA 132896 || ||| | || | || ||| || || | || |||| ||||| || ||| Sbjct 44667 GATGATCTTTTGCACAAGGTCCTTGCTGGGGCGGTTGTTCAGATGCGAGAACAGCAGGCA 44608 Query 132897 AGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCC 132956 |||||||||| |||| |||||| || | ||||| || ||||| ||| |||| || Sbjct 44607 AGCAAAGTCGGTGTGCAGGCCCTCATCACGAGAAATAAGCTCGTTTGAGAAGGTCAGACC 44548 Query 132957 GGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGAC 133016 |||||||| || || || |||||| || |||| |||||| ||| || || |||| Sbjct 44547 AGGCATGAGACCACGCTTGCGGAGCCAGAAGATGGAGGCGAAGGCGCCTGAGAAAAAGAT 44488 Query 133017 GCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGAT 133076 ||||||||| || || || || || ||||||| | | ||||| | || ||| || ||| Sbjct 44487 GCCCTCGACAGCAGCAAAGGCAACTAGGCGCTGGGCAAACGTCGACTCCTTGTCGGTGAT 44428 Query 133077 CCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAA 133136 ||| ||| ||||| |||||||| || ||| || || || || ||||| || || Sbjct 44427 CCACTTCAGAGCCCAGTCGGCCTTGCGGCGGATGCAGGGAATAGTGTCAATGGCATTGAA 44368 Query 133137 CAAACGGAGTTTCTCTTCCGAGGAACGC---ACGTAGGTGTCGATGAGGGTCGAATACAT 133193 || || | | | ||||| | | ||||||||| || || ||| || | Sbjct 44367 CA---GGTATGTGCGCTGCGAGGGCTCCTTGATGTAGGTGTCAATCAGCAGCGAGTAGGT 44311 Query 133194 TTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCAC 133253 ||| ||||| | ||| ||||| ||| || || ||||| ||||| || |||||| | Sbjct 44310 TTCAGAGTGGATGTTTTCCATCATGATCTGGAAACCGTAGAAGCAGCGGGCCTCGGGGAT 44251 Query 133254 CTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGC 133313 |||||| || | ||| ||||| || |||||||||||||||||||| || ||| || Sbjct 44250 CTGCACCTCGCCTGAGAAGCGCTCAACGAGATTTTCGTTGACGATGCCATCAGAGGCAGC 44191 Query 133314 GAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCG---CTCCCA 133370 || ||||| || | ||| |||||| | |||||| | ||||| || | ||| Sbjct 44190 AAAGAAGGCAAGAATGTGGGAGATGAAGTACTGCTCGTCTTTGTTCAGACGGTTGTTCCA 44131 Query 133371 GTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTT 133430 |||| | ||||| ||||| || | |||||| | ||||| || || |||||||| || Sbjct 44130 GTCGTGGAGATCCTTAGACAGATCAATCTCCTCAGCAGTCCAGAAGGAGGCCTCGGCCTT 44071 Query 133431 TTTGTACAT 133439 |||||||| Sbjct 44070 CTTGTACAT 44062 >seq28 Length=151797 Score = 134 bits (148), Expect = 1e-26 Identities = 167/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || | |||||||| ||||| ||| |||| |||||| || | Sbjct 108778 ATGCAAATCTTCGTCAAGACCTTGACGGGCAAGACCATTACCCTCGAAGTCGAGTCCTCT 108837 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | | | | || || |||| || || ||||| || || ||||||| Sbjct 108838 GATACCATTGACAATGTCAAGTCCAAGATCCAGGATAAGGAGGGTATCCCTCCCGACCAG 108897 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| ||||| | ||| || || ||||| || || | ||||||||| |||||||||| Sbjct 108898 CAGCGTCTCATCTTCGCTGGAAAGCAGCTTGAGGATGGCCGCACCCTCTCCGACTACAAC 108957 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472 ||||| ||||| | || || || ||||| |||||| || | || |||| Sbjct 108958 ATCCAGAAGGAGTCTACTCTTCACTTGGTTCTGCGTCTGCGTGGTGGCC 109006 Score = 113 bits (124), Expect = 5e-20 Identities = 156/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 38256 GTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA- 38314 || || || || || || || ||||| ||| |||| |||||| || |||||| | | | Sbjct 108334 GTCAAGACCCTTACCGGAAAGACCATTACCCTCGAAGTCGAGTCCTCCGACACCATTGAC 108393 Query 38315 AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCAT 38374 |||| | || || |||| ||||| ||||| ||||| | ||||| ||||| ||||| Sbjct 108394 AACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCTCCGGACCAGCAGCGTCTCAT 108452 Query 38375 TTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGA 38434 | ||| || || ||||| || || | || ||||| |||||||||||| || || || Sbjct 108453 CTTCGCTGGAAAGCAGCTTGAGGATGGCCGTACCCTTTCCGACTACAACATTCAGAAAGA 108512 Query 38435 AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 | | || || || ||||| |||||| || | || || Sbjct 108513 ATCTACTCTTCACTTGGTCCTGCGTCTGCGTGGTGG 108548 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || | |||||||| ||||| ||| |||| |||||| || | Sbjct 108550 ATGCAAATCTTCGTCAAGACCTTGACGGGCAAGACCATTACCCTCGAAGTCGAGTCCTCT 108609 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | | | | || || |||| || || ||||| || ||| | || || Sbjct 108610 GATACCATTGACAATGTCAAGTCCAAGATCCAGGATAAGGAGGGTATCCCCCCGGATCAG 108669 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| ||||||| || || || ||||| || || | || ||||| ||||||||| Sbjct 108670 CAGCGTCTCATTTTTGCTGGAAAGCAGCTCGAGGATGGCCGTACCCTGTCGGACTACAAC 108729 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 || || || ||| | || || || ||||| |||||| || | || || Sbjct 108730 ATTCAGAAAGAATCTACTCTTCACTTGGTTCTGCGTCTGCGTGGTGG 108776 Score = 96.9 bits (106), Expect = 3e-15 Identities = 138/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 38268 ACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAAGA 38326 || ||||| ||||||||| |||| || ||| || | || | | | |||| |||| Sbjct 108062 ACTGGCAAGACCATCACCCTCGAGGTGGAGTCCTCGGATACTATTGACAACG-TTAAGTC 108120 Query 38327 AAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAA 38386 || |||| ||||| ||||| || || | ||||| ||||| ||||| | ||| || || Sbjct 108121 TAAGATCCAGGACAAGGAGGGTATCCCTCCGGACCAGCAGCGTCTCATCTTCGCTGGAAA 108180 Query 38387 ACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCA 38446 ||||| || || | |||||||| |||||||||||| || ||||| | || || || Sbjct 108181 GCAGCTTGAGGATGGCCGCACCCTGTCCGACTACAACATTCAGAAGGAGTCTACTCTCCA 108240 Query 38447 TTTGGTGCTGCG 38458 | | ||||| || Sbjct 108241 TCTAGTGCTCCG 108252 >seq100 Length=89839 Score = 91.5 bits (100), Expect = 1e-13 Identities = 136/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||| || || || ||||| || || || ||| |||| || ||| || Sbjct 17019 AAGATGCAGATTTTCGTCAAGACCCTTACGGGTAAGACGATTACCCTCGAGGTTGAGTCC 17078 Query 38301 ACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC 38360 | |||| | | | | || || || | ||||| ||||| |||||| | ||| Sbjct 17079 TCGGACACTATCGACAATGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCCCCGGAC 17138 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 || ||||| || || | ||| ||||| |||||||| || | || ||||| |||||| Sbjct 17139 CAGCAGCGCCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGTACCCTGTCTGACTAC 17198 Query 38421 AACATCCAAAAGG 38433 ||||| || |||| Sbjct 17199 AACATTCAGAAGG 17211 >seq61 Length=115161 Score = 87.8 bits (96), Expect = 2e-12 Identities = 145/207 (70%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || || ||||| || ||||| ||| | || |||||| | | |||| | Sbjct 22480 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTGGAGGTCGAGTCTTCGGACACGATC 22421 Query 38313 CA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCT 38371 | |||| | || || |||| ||||| ||||| |||||| | ||||| ||||| | Sbjct 22420 GACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCTT 22362 Query 38372 CATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAA 38431 || | || || || ||||| || || | ||||| || ||||||||||||||| || Sbjct 22361 GATCTTTGCTGGTAAGCAGCTTGAGGATGGCCGCACTCTGTCCGACTACAACATCCAGAA 22302 Query 38432 GGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||| | || || || | || ||||| Sbjct 22301 GGAGTCCACCCTCCACCTTGTCCTGCG 22275 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500166672883200