Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20manginecans_20[genbank_20GCA_5F000712455.1_202014-06- 26] 980 sequences; 31,706,104 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq116 206 3e-48 seq105 107 2e-18 >seq116 Length=83673 Score = 206 bits (228), Expect = 3e-48 Identities = 1049/1648 (64%), Gaps = 47/1648 (3%) Strand=Plus/Minus Query 111705 TTCATCCACGCAACACCAACCCTCTTCAACGCTGGTACACCAAGACCCCAAATGTCCAGT 111764 |||| |||||| |||| || ||||| || || ||||| || | || |||| Sbjct 76931 TTCACTCACGCATCACCTACGCTCTTTAATGCCGGTACTCCCCAGGCTCAGTTGTCTTCA 76872 Query 111765 TGTTTCCTTATTGCAAACAAGGAGGATTCAATCAATGGCATTTACGGCACTCTCACTGAA 111824 |||||||| | | | ||||| || ||| | |||||||||| || |||| Sbjct 76871 TGTTTCCTAGTCGACATGAAGGATGACAGCATCGAGGGCATTTACGATACCCTCAAGACT 76812 Query 111825 TGTGCCCAAATCTCAAAGTGGGCTGGTGGTATCGGGATGCACATCCATGATGTCAGAGCC 111884 |||||| || || ||| ||||||||||||||| | | | || | | | ||| Sbjct 76811 TGTGCCATGATTTCCAAGATGGCTGGTGGTATCGGTCTCAATGTTCACCGTATTCGTGCC 76752 Query 111885 AACAAGTCTCGTATTAGAGGTACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGC 111944 | ||| ||| || || || ||| || | || || |||| ||||| || Sbjct 76751 ACTGGCTCTTACATTGCTGGCACTAACGGTACTTCGAACGGCATCGTTCCCATGCTACGT 76692 Query 111945 GTATTTAACGCCACAGCGCGCTATGTAAACCAAGCTGGGCGTCGCAAGGGATCTA----- 111999 || || ||| ||| || || ||||| |||| | ||| |||| || || Sbjct 76691 GTTTTCAACAACACCGCCCGTTATGTTGACCAGGGTGGAAA---CAAGCGACCTGGAGCC 76635 Query 112000 -TCGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTC 112058 | || | ||||| ||||||||||| || ||| || | |||||||| || || || Sbjct 76634 TTTGCCATTTATCTCGAGCCATGGCATGCTGATGTCTTCGAGTTCCTCGACTTACGCAAG 76575 Query 112059 AACCAAGGTGATGAGGAGGCGCGGTGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGA 112117 ||||| || | || || | || ||| || || || |||| || || ||||| || Sbjct 76574 AACCACGGAAAGGAAGAAGTCCG-TGCTCGTGACCTATTCTTGGCCCTGTGGATCTGCGA 76516 Query 112118 TCTCTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGAC-AAGG 112176 | ||||||||| | |||||| ||| || | ||| ||||| | || || | || | Sbjct 76515 CTTGTTCATGAAGCGTGTTGAGAAGAATGAGGACTGGACTCTCATGTGCCCCAATGAATG 76456 Query 112177 CACCCGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGG 112236 | ||||| | | ||| | || || |||||||| || || || |||||||||| Sbjct 76455 C-CCCGGCTTGGCGGATTGCTATGGCGAAGAGTTTGAGGCTCTGTATGAAAAGTACGAGA 76397 Query 112237 AAGAAAGTCGGGCGACTGCGACGGTGCCAGCTGCCG--ATGTGTGGAAAGCTATTCTCAA 112294 | || |||| | | | || | || || || | ||||| | || ||||| | Sbjct 76396 AGGAGGGTCGCG-GTC-GCATGGTTGTCAAGGCCCAGAAACTGTGGTATGCCATTCTGGA 76339 Query 112295 GTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAG 112354 | |||| || |||||||| | || | |||||| ||||||||| ||| |||| ||||| Sbjct 76338 GGCTCAGACTGAGACTGGCAACCCTTTTATGCTCTACAAAGACCACTGCAACCGCAAGAG 76279 Query 112355 TAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATT 112414 ||||| || ||| | ||| || ||||| ||||| || || || || | || | Sbjct 76278 CAATCAGAAAAATCTAGGTACCATTCGCAGTTCGAACCTGTGCACTGAGATTATCGAGTA 76219 Query 112415 TACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGT 112474 | | |||||| |||||||| ||||| ||||| | || || || | || Sbjct 76218 CTGTGCCCCTGATGAGGTCGCTGTGTGCAACCTAGCATCTCTAGCCCTTCCTTCCTTCGT 76159 Query 112475 GGATCCAGAGACAAAGACA--TTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTC 112532 ||| | | | |||| | | ||| | | |||| || |||||||| || || ||| Sbjct 76158 GGA-CTACA-ACAAGGGTGAGTATGACTTTAAAAAGCTACACGAAGTCACCCAAGTTGTT 76101 Query 112533 ACAAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAA 112592 ||||||||| | | || ||| ||| ||||| || || |||| || Sbjct 76100 GTTCGCAACCTAAACCGCATCATCGATGTGAATCACTACCCTGTCCAGGAAGCTCACAAC 76041 Query 112593 TCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCATT 112652 || ||| | |||||||| |||||| ||||||| || || || || || | ||| || Sbjct 76040 AGCAACATGCGCCACCGTCCCATTGGTGTCGGTGTACAGGGCCTGGCTGACGCTTTCCTT 75981 Query 112653 CTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAG 112712 | ||| | ||||| ||| ||||| | |||| || || ||||| Sbjct 75980 GCTCTCCGCATGCCTTTTGAATCCCCTGAAGCACGCCAGCTCAACAAGCAGATTTTTGAA 75921 Query 112713 ACAATGTATCACGCCGCTCTTGAGGCGAGTTC---GGAGTTGGCAGAGGTTGATGGTCCA 112769 || || || |||||||| || || ||| ||| | || || || ||| | Sbjct 75920 ACCATCTACCACGCCGCACTAACTGC---TTCAATGGAAATCGCCCAGACGGAGGGTACT 75864 Query 112770 TATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAA 112829 || ||| | |||||||||||| | || ||||| | | || |||||||||||||| Sbjct 75863 TACTCAACTTATGAGGGTTCTCCTGTCTCCCAAGGCATCTTGCAGTTTGATATGTGGGAT 75804 Query 112830 GGTGAGACCAAGCT-TCACTACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGG 112888 | ||| || || || | |||||| |||| ||||| || ||| || | || Sbjct 75803 G-TGACTCCTAGTGATCTGTGGGACTGGACTTCTCTAAAGGAGAAGATTAAGCAGCATGG 75745 Query 112889 TCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGG 112948 | | || || |||| | | ||||| ||||| |||||| ||| | || || |||| Sbjct 75744 TGTACGCAATTCTCTTCTAGTTGCACCCATGCCTACAGCCAGCACGTCGCAGATTCTGGG 75685 Query 112949 TAATAATGAATGCTTTGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGG 113008 || ||||| ||||| ||||||||||| | ||||| || | | | | || || || Sbjct 75684 CAACAATGAGTGCTTCGAACCCTACACATCCAACATTTACCAGCGCCGCGTTCTTGCTGG 75625 Query 113009 AGAGTTTGTGATTGTCAACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTC 113068 ||||| | | |||||| ||| | |||||| || ||||| | ||||| Sbjct 75624 CGAGTTCCAGGTCGTCAACCCCTGGCTCCTACGTGACCTAGTCGATCTTGGTTTATGGTC 75565 Query 113069 CAAGGATATGAAGGATCTCATGGTGAAAGCGG---GTGGTTCCATTCAAAATAT-TGTGG 113124 | |||||||| ||| || | | |||| ||| |||||||| || || | | | Sbjct 75564 TGACAATATGAAGAATCGCA---TTATTGCGGACAATGGCTCCATTCAGAACATCTCTAG 75508 Query 113125 ATATTCCAGATGAAATTAAGAAGTTGTACCGCACAGTTTGGGAAAT---CAAGATGAAGG 113181 ||||| | ||| ||||| ||||| || |||||||| || | || | | Sbjct 75507 -CATTCCTGCTGATATTAAAGCTCTGTACAAGACCGTTTGGGAGATTTCCCAGCGTACAG 75449 Query 113182 ATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATC 113241 || | | ||||| || ||||||||| |||||||| ||| || ||| | | Sbjct 75448 TTG---TGCAAATGGCTGCTGATCGTGGTGCTTTCATTGACCAA--TCGCAGTCTCTAAA 75394 Query 113242 TATT--CATGGAAAGTCCAACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAA 113299 ||| |||| || ||| || ||| |||| || | |||||| | | ||||| Sbjct 75393 CATTCACATGAAAGATCCTACCATGGGCAAGATCACCAGCATGCACTTTGCTGGCTGGAA 75334 Query 113300 GAAGGGTCTCAAAACGGGGATGTATTAC 113327 |||||||| ||||| ||||| ||| Sbjct 75333 ACTAGGTCTCAAGACGGGCATGTACTAC 75306 >seq105 Length=86313 Score = 107 bits (118), Expect = 2e-18 Identities = 343/523 (66%), Gaps = 13/523 (2%) Strand=Plus/Plus Query 101817 TGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGAC---TCTAAAT 101873 ||||||||||| ||| | ||||| || |||||| | |||| ||||| | ||| || Sbjct 44089 TGGACTGCTGAGGAGATTGATCTGTCTAAGGATCTCCACGACTGGAACAACCGTCTGAAC 44148 Query 101874 GAAAATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGGTCCGATGGAATT 101933 || | || || | ||||| |||| || || |||||||||| || ||||| || Sbjct 44149 AAAGACGAGCAGTACTTCATCTCCCACATTCTTGCCTTCTTTGCTGCCTCTGATGGCATC 44208 Query 101934 GTTTTTGAGAATATCAATAACAACTTTGCTGATGAGGTGCA-ATCCTCTGAAGCGAGATC 101992 || || ||| || | | ||| | | |||||||| |||| | || || | | Sbjct 44209 GTCAACGAAAATCTCGTTGAGCGCTTCTCAGGCGAGGTGCAGATCCCC-GAGGCCCGCTG 44267 Query 101993 TTTCTATGCGTATCAATGTCATAATG-AAATGGTGCATGGGGAGACATACAGTAAACTCA 102051 ||||| | || || | |||| ||| ||| | || || || ||| || | Sbjct 44268 CTTCTACG-GTTTCCAGATCATGATGGAAAACATCCACTCTGAAACCTACTCGCTGCTGA 44326 Query 102052 TAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAAACAG 102111 | |||| || || ||||| | || | | || || | ||||| | || Sbjct 44327 TTGACACCTACATCAAGGAGCCCTCGCAGCGCACATACCTGTTCAATGCCATTGACACTA 44386 Query 102112 TTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAA--AGTCGC 102168 |||| || || | || || || |||||| |||||||| | |||| ||||| Sbjct 44387 TTCCCTGCATCCGCCGCAAGGCCGACTGGGCTCTGAAGTGGATCACCGACAAGGAGTCGA 44446 Query 102169 GTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTT 102228 | ||||| |||| || | || ||||| ||| ||||| ||||| ||||| || Sbjct 44447 ---CGTTTGCCCAGCGCCTAGTTGCCTTTGCTGCTGTCGAGGGCATCTTTTTCTCAGGCG 44503 Query 102229 CCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCA 102288 ||||| | | || | |||||| ||||| ||||||||||| ||||| |||||| | Sbjct 44504 CCTTCGCCTCCATCTTCTGGCTCCGCAAGCGTGGTCTCATGCCTGGTCTGACCTTCTCAA 44563 Query 102289 ACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 |||||||||| |||||||| ||||| || ||| || ||||| Sbjct 44564 ACGAGCTTATTTCTCGTGATGAGGGCCTGCACACCGACTTTGC 44606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620734795905600