Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ceratocystis_20manginecans_20[genbank_20GCA_5F000712455.1_202014-06- 26] 980 sequences; 31,706,104 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq116 190 2e-43 seq415 114 2e-20 seq105 100 3e-16 >seq116 Length=83673 Score = 190 bits (210), Expect = 2e-43 Identities = 1101/1742 (63%), Gaps = 66/1742 (4%) Strand=Plus/Plus Query 109364 CTGGCTCTAAACTAAATTGGATTGGTCGAGCTTTCGCCTTCGAGCGAAGATAATACATAC 109423 |||| |||| | | |||||||| ||| ||| |||| || || | || ||||| | Sbjct 75258 CTGG-TCTACAGTGAATTGGATAGGTGCAGCAGCAGCCTGCGTACGTAAGTAGTACATGC 75316 Query 109424 CCGTTTTGAGACCAGCCTTCCATGCGTACATA-TGCATTGAAGAGAGTTTGGAAAGTGTC 109482 |||| |||||||| ||||| || || | ||||| | || ||| | || Sbjct 75317 CCGTCTTGAGACCTAGTTTCCA-GCCAGCAAAGTGCATGCTGGTGATCTTGCCCATGGTA 75375 Query 109483 GGACTCTCCATAAACAAGTTCATCGACTGAGACTGATCGATGAATCGACCACGATCAGCC 109542 ||| | ||| | ||| | ||||| || || || ||||| |||||||||||| Sbjct 75376 GGATCTTTCATGTGAATGTTTAGAGACTGCGATTGGTCAATGAAAGCACCACGATCAGCA 75435 Query 109543 GCCATGTCGATGA---TACACTTTTGGCTAATTTCCCAGACAGTCTTGTACAAATTCTTG 109599 ||||| | | | ||| || || ||| ||||| || |||||||||| | || Sbjct 75436 GCCATTTGCACAACTGTACGCT---GGGAAATCTCCCAAACGGTCTTGTACAGAGCTTTA 75492 Query 109600 ATATCATCGGGAATGTCCACGATGTTTTGAATAGAGCCACCAGCCTTCACCATGAGATCC 109659 |||||| | |||||| |||||| ||||| |||||| || | ||| ||| | Sbjct 75493 ATATCAGCAGGAATGCTAGAGATGTTCTGAATGGAGCCATTGTCCGCAATAATGCGATTC 75552 Query 109660 TTCATCTCTTTCGACCAGAGACCGACCTTTTTGAGATCGTCAACAAGATGCTTG---TTG 109716 ||||| | | ||||| | ||| | | || |||| || || | ||| Sbjct 75553 TTCATATTGTCAGACCATAAACCAAGATCGACTAG---GTCACGTAGGAGCCAGGGGTTG 75609 Query 109717 ACCACGACAAATTCACCAGCAAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCG 109776 || || || || |||||||| ||| || |||| ||||| | |||||||||||| Sbjct 75610 ACGACCTGGAACTCGCCAGCAAGAACGCGGCGCTGGTAAATGTTGGATGTGTAGGGTTCG 75669 Query 109777 AAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGA 109836 || |||||||||||||| || || || | ||| ||||| |||||||| || | ||| Sbjct 75670 AAGCACTCATTGTTGCCCAGAATCTGCGACGTGCTGGCTGTAGGCATGGGTGCAACTAGA 75729 Query 109837 AGACTGTTTCGGAGACCCTTCGTCTTTACCCGCTCACGCATTGCGTCCCAATCATAACGA 109896 ||| || || | ||| | | ||| | | ||| | | ||| || | || Sbjct 75730 AGAGAATTGCGTACACCATGCTGCTTAATCTTCTCCTTTAGAGAAGTCCAGTCCCACAGA 75789 Query 109897 CCACTAAATTTAGTCTCACCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGA 109956 ||||| |||| || ||||||||||| || | | || | | ||||| Sbjct 75790 TCACTAGG---AGTCACA---TCCCACATATCAAACTGCAAGATGCCTTGGGAGACAGGA 75843 Query 109957 GAACCCTTGAAACTCTCGTACGACCCCTCAACCTCGGCCAACTCGGATGAAGCCTCTAGT 110016 ||||||| || | ||| | ||||| || ||| | || |||||| |||| Sbjct 75844 GAACCCTCATAAGTTGAGTAAGTACCCTCCGTCTGGGCGATTTCCATTGAAGCAGTTAGT 75903 Query 110017 GCCGCATGATACATAGTCTCAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAG--- 110073 || || || || || || |||||||| || || | |||| | ||||| | Sbjct 75904 GCGGCGTGGTAGATGGTTTCAAAAATCTGCTTGTTGAGCTGGCGTG---CTTCAGGGGAT 75960 Query 110074 TCGAAGGGAAGACCACAAAGAATAAACACATCCGCTAGACCCTGAACACCGAGACCAATG 110133 || || || | | | || || | || || || ||||| ||||||| ||||||| Sbjct 75961 TCAAAAGGCATGCGGAGAGCAAGGAAAGCGTCAGCCAGGCCCTGTACACCGACACCAATG 76020 Query 110134 GGGCGATGCTTCATGTTAGAGCGTCGAGCAGTTTCT--ACGGGGTAAAAGTTGCGGTCGA 110191 || || || |||||| | |||| || || || ||||| || |||| Sbjct 76021 GGACGGTGGCGCATGTTGCTGTTGTGAGC--TTCCTGGACAGGGTAGTGATTCACATCGA 76078 Query 110192 TGACCCGATTGAGATTCTTCGTCACAGTCTTCGTGATTTCATGGAGTTT------GTCGT 110245 ||| || || || || ||| | |||| ||| || || || ||| | Sbjct 76079 TGATGCGGTTTAGGTTGCGAACAACAACTTGGGTGACTTCGTGTAGCTTTTTAAAGTCAT 76138 Query 110246 AATCGAACGTTTTCGTC-TCCTTATTGACATATTTGGGGAGAGCAATAGACGCAAGATTG 110304 | || | | || | || ||| || | || || || | ||| || || ||| Sbjct 76139 ACTC-ACCCTTGTTGTAGTCC------ACGAAGGAAGGAAGGGCTAGAGATGCTAGGTTG 76191 Query 110305 CACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTC 110364 ||||||| ||| || | | ||| || | ||| || || |||| ||| ||||| Sbjct 76192 CACACAGCGACCTCATCAGGGGCACAGTACTCGATAATCTCAGTGCACAGGTTCGAACTG 76251 Query 110365 TTAATGACACCCAAGTTCTTCTGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATG 110424 |||| ||| | || |||||||| ||| |||||| || || |||||||| Sbjct 76252 CGAATGGTACCTAGATTTTTCTGATTGCTCTTGCGGTTGCAGTGGTCTTTGTAGAGCATA 76311 Query 110425 TATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATGGCCTTCCATACATCGGCGGCGGGG 110484 | ||| | ||||| || ||||| | || |||||||| | ||| | | ||| | Sbjct 76312 AAAGGGTTGCCAGTCTCAGTCTGAGCCTCCAGAATGGCATACCACAGTTTCTGGGCCTTG 76371 Query 110485 ACAGT--TGCGTTAGCGAGACCTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCT 110542 ||| |||| | || |||| |||| ||||||||| |||| ||||||| || | Sbjct 76372 ACAACCATGCG--ACCGCGACCCTCCTTCTCGTACTTTTCATACAGAGCCTCAAACTCTT 76429 Query 110543 GTCCGTACACATCAGAAAGACCCTTCGCCTTG-TCGGGACAGAAGAGGGACCAATTTCCA 110601 || || ||| | | | || || || | ||| || | ||| | ||| | || Sbjct 76430 CGCCATAGCAATCCGCCA-AGCCGGGGCATTCATTGGGGCACATGAGAGTCCAGTCCTCA 76488 Query 110602 CCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGG 110661 || |||||| | ||||||||||| ||| ||||||| ||| |||| |||||||| Sbjct 76489 TTCTTCTCAACACGCTTCATGAACAAGTCGCAGATCCACAGGGCCAAGAATAGGTCACGA 76548 Query 110662 CAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAG 110721 ||| | ||||| | || ||||| ||||| || | || || | || ||| | Sbjct 76549 GCACGGACTTCTTCCTTTCCGTGGTTCTTGCGTAAGTCGAGGAACTCGAAGACATCAGCA 76608 Query 110722 TGCCATGGTTCGAGATAGACAGCGATGGATCCCTTACGACG------ACCCGCCTGGTTA 110775 |||||||| |||||||| | || | || ||| | | || || |||||| | Sbjct 76609 TGCCATGGCTCGAGATAAATGGCAAAGGCTCC---AGGTCGCTTGTTTCCACCCTGGTCA 76665 Query 110776 ACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCATCGGATTGACCA 110835 ||||| || || ||| ||||| || | ||||| |||| || || | || ||| Sbjct 76666 ACATAACGGGCGGTGTTGTTGAAAACACGTAGCATGGGAACGATGCCGTTCGAAGTACCG 76725 Query 110836 TTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATATGCATACCAATACCA 110895 || || || ||| || | |||||||||| ||| | || | ||| |||||| Sbjct 76726 TTAGTGCCAGCAATGTAAGAGCCAGTGGCACGAATACGGTGAACATTGAGACCGATACCA 76785 Query 110896 CCCGCCCACTTACTAATTTGTGCAC-ACTCTGTGAGTGTACCATAAATACCATCAATCGA 110954 || ||| ||| ||| |||| | ||| |||| ||| | ||||| || || || Sbjct 76786 CCAGCCATCTTGGAAATCATGGCACAAGTCT-TGAGGGTATCGTAAATGCCCTCGATGCT 76844 Query 110955 ATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATT 111014 || |||| || | | ||| || || ||||||| ||||| | || || || ||||| Sbjct 76845 GTCATCCTTCATGTCGACTAGGAAACATGAAGACAACTGAGCCTGGGGAGTACCGGCATT 76904 Query 111015 GAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTG--GGACATCTTGTTGTATGTGTCG 111072 ||||| ||||||| || ||| ||| ||| |||| ||||| |||||| || || Sbjct 76905 AAAGAGCGTAGGTGATGCGTGAGTGA--AGAACTTGCTAGACATAAGGTTGTAGGTTTCA 76962 Query 111073 AG 111074 || Sbjct 76963 AG 76964 >seq415 Length=20797 Score = 114 bits (126), Expect = 2e-20 Identities = 336/507 (66%), Gaps = 28/507 (6%) Strand=Plus/Plus Query 11503 CGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCG 11562 |||||||||||||| || | | || || | ||| || | ||| | ||||| || || Sbjct 13458 CGATCGAAACGACCGGGTCTCATCAGCGCCTTATCCAGGACATCAGCGCGGTTGGTGCCG 13517 Query 11563 GCAATGACTACAAT--GCCAGTCTCATTGTCGAAACCGTCCATTTCTGTGAGAAGCTGGT 11620 || | ||| || || || | | ||| ||| || |||||||| || || | ||||| Sbjct 13518 GCCAGGACAACGATTTGCTCGGCGG--TGTTGAAGCCATCCATTTCAGTCAGGATCTGGT 13575 Query 11621 TGATCGTCTGTTCACGCTCATCGTTGGAGGGCATACCACCTGC----CGAA-CGCTTCTT 11675 ||| ||| || |||||||||||| | | ||| ||| ||| ||||||| Sbjct 13576 TGAGCGTGGACTCGCGCTCATCGTTGCCA--CCTCCCA--TGCGGTTCGAGTCGCTTCTG 13631 Query 11676 A-----CCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCC 11730 || | ||| |||||||| || || || | ||| || || ||| || ||| Sbjct 13632 GAGCGGCCAATAGCATCAATCTCGTCAATAAAAATGATGCATGGCGCGTTCTTGCGCGCC 13691 Query 11731 TGTTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTT 11790 | ||||| ||||| |||||| || || || || || |||||||| || || | Sbjct 13692 GTAGCAAAAAGATCACGCACACGCGACGGACCCACGCCGACAAACATCTCGACAAACTCG 13751 Query 11791 GCG--GCAGAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGA 11848 | | || || | ||||| ||| ||||| ||||| ||||| |||| || || | Sbjct 13752 GAGCCGCTGA-CGCTGAA-GAACGGAACGCCTGACTCGCCAGCCGTGGCCTTGGCTAGCA 13809 Query 11849 GAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACC-- 11906 | ||||| ||||| || || | || | || | ||||| || |||||||||||||| Sbjct 13810 GCGTCTTGCCCGTTCCCGGAGGGCCCGATAGGATAGCGCCGCGCGGGATCTTGGCACCCA 13869 Query 11907 -ACTTCCAAAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCT 11965 || |||| | || |||||||||||||| | ||||| |||| | || ||| Sbjct 13870 GACGCACAAACT---TTTCGGGCTTCTTGAGGAATTGCACAAACTCCATGATCTCGACCT 13926 Query 11966 TGGCGGAGTCGATACCCTCAACATCGG 11992 |||| ||| || || | ||||||| Sbjct 13927 TGGCCTCGTCCATTCCGGCCACATCGG 13953 >seq105 Length=86313 Score = 100 bits (110), Expect = 3e-16 Identities = 336/511 (66%), Gaps = 14/511 (3%) Strand=Plus/Minus Query 119508 TGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCT 119567 || || || ||||| ||||| || ||||| || |||| || ||||||||||| || Sbjct 44594 TGCAGGCCCTCATCACGAGAAATAAGCTCGTTTGAGAAGGTCAGACCAGGCATGAGACCA 44535 Query 119568 CTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAG 119627 | || ||||| ||||||| || || || || ||||||||||| ||| Sbjct 44534 CGCTTGCGGAGCCAGAAGATGGAGGCGAAGGCGCCTGAGAAAAAGATGCCCTCGACAGCA 44475 Query 119628 GCGAAAGCGAATAGACGCTCAGCAAAAGGTCGA-GACTTGTC---GAACCACTTGAGAGC 119683 || || || | ||| |||| || ||| ||||| |||||| || |||||| ||||| Sbjct 44474 GCAAAGGCAACTAGGCGCTGGGC-AAACGTCGACTCCTTGTCGGTGATCCACTTCAGAGC 44416 Query 119684 CCAGTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAA-AAGTTGCTTCT 119742 ||||| |||||| || |||||||| | ||| | ||||| | ||| | || | | Sbjct 44415 CCAGTCGGCCTTGCGGCGGATGCAGGGAATAGTGTCAATGGCATTGAACAGGTATGTGCG 44356 Query 119743 TTTC-AGCACCATCCTTAATATATTTATCAATGAGTTTAGAGTAGGTCTCACCATGAACC 119801 | | || | ||||| || || | ||||| || |||||||| ||| || | Sbjct 44355 CTGCGAGGGC--TCCTTGATGTAGGTGTCAATCAGCAGCGAGTAGGTTTCAGAGTGGATG 44298 Query 119802 ATTT-CATTGTGTGACTGATAGGCATAAAATGAGCGAGCTTCGGAAATTTGCACTTCGTC 119860 ||| ||| || ||| | | || || |||| || |||| || ||||| ||| | Sbjct 44297 TTTTCCATCATG-ATCTGGAAACCGTAGAAGCAGCGGGCCTCGGGGATCTGCACCTCGCC 44239 Query 119861 AGCAAAATTGTTGTTGATATTTTCAAAAACAATTCCATCGGATCCAGCGAAGAATGCTAA 119920 | || | || |||||| || || ||||| || |||| ||||| || | Sbjct 44238 TGAGAAGCGCTCAACGAGATTTTCGTTGACGATGCCATCAGAGGCAGCAAAGAAGGCAAG 44179 Query 119921 GATGTACTTTATGAATTTCTGTTCATTATCGTT--GAGTGTT-TTCCAGTCGTCCATATC 119977 |||| ||||| | ||| || | | ||| || ||| |||||||||| | ||| Sbjct 44178 AATGTGGGAGATGAAGTACTGCTCGTCTTTGTTCAGACGGTTGTTCCAGTCGTGGAGATC 44119 Query 119978 TTTAGACAAGTCCACCTCTTCAGCTGTCCAG 120008 ||||||| || | ||| ||||| |||||| Sbjct 44118 CTTAGACAGATCAATCTCCTCAGCAGTCCAG 44088 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588968785044000